Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.298893	Csnk2a1	casein kinase II, alpha 1 polypeptide	2	2 H1	12995
Gene Ontology	ATP binding | beta-catenin binding | kinase activity | protein amino acid phosphorylation | protein binding | protein kinase activity | protein kinase CK2 complex | protein serine/threonine kinase activity | transferase activity | Wnt receptor signaling pathway
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 64 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCAGGGGGCA 6.5 0.0065 P8 Cb GC AAGGTCTTTA 3.3 0.0033 P8 Cb GC TGGTGGAATG 3.3 0.0033 P8 Cb GC AAATATTCCA 1.6 0.0016 P8 Cb GC CCATCCAGTG 1.6 0.0016 P8 Cb GC TTGGATTTGT 1.6 0.0016 Cb medulloblastoma AAGGTCTTTA 4.6 0.0046 Cb medulloblastoma TGGTGGAATG 2.3 0.0023 Cb medulloblastoma TTGGATTTGT 2.3 0.0023 P8 GC+1d culture AAGGTCTTTA 5.7 0.0057 P8 GC+1d culture AAATATTCCA 3.4 0.0034 P8 GC+1d culture CCATCCAGTG 3.4 0.0034 P8 GC+1d culture GCAGGGGGCA 1.1 0.0011 P8 GC+1d culture TGGTGGAATG 1.1 0.0011 P8 GC+SHH+1d culture AAGGTCTTTA 9.4 0.0094 P8 GC+SHH+1d culture AAATATTCCA 2.3 0.0023 P8 GC+SHH+1d culture GCAGGGGGCA 2.3 0.0023 P8 GC+SHH+1d culture CCATCCAGTG 1.2 0.0012 P8 GC+SHH+1d culture GTACTGGGCA 1.2 0.0012 3T3 fibroblasts TGGTGGAATG 10.5 0.0105 3T3 fibroblasts CCATCCAGTG 7 0.007 3T3 fibroblasts GCAGGGGGCA 7 0.007 3T3 fibroblasts TTGGATTTGT 7 0.007 E15 cortex TGGTGGAATG 14.8 0.0148 P1 cortex AAATATTCCA 13.6 0.0136 P1 cortex TGGTGGAATG 9.1 0.0091 P1 cortex AAGGTCTTTA 4.5 0.0045 P1 cortex GCAGGGGGCA 4.5 0.0045 Hypothalamus AAATATTCCA 3.6 0.0036 Hypothalamus TGGTGGAATG 1.8 0.0018 E12.5 retina AAGGTCTTTA 20.7 0.0207 E12.5 retina GCAGGGGGCA 1.9 0.0019 E12.5 retina TGGTGGAATG 1.9 0.0019 E12.5 retina TTGGATTTGT 1.9 0.0019 E14.5 retina AAGGTCTTTA 5.5 0.0055 E14.5 retina GTACTGGGCA 3.6 0.0036 E18.5 retina AAGGTCTTTA 5.5 0.0055 E18.5 retina TGGTGGAATG 3.6 0.0036 E18.5 retina AAATATTCCA 1.8 0.0018 E18.5 retina GCAGGGGGCA 1.8 0.0018 E18.5 retina GTACTGGGCA 1.8 0.0018 P0.5 retina GCAGGGGGCA 7.9 0.0079 P0.5 retina AAATATTCCA 3.9 0.0039 P0.5 retina TGGTGGAATG 3.9 0.0039 P0.5 retina AAGGTCTTTA 2 0.002 P2.5 retina AAGGTCTTTA 8.8 0.0088 P2.5 retina GCAGGGGGCA 3.5 0.0035 P2.5 retina AAATATTCCA 1.8 0.0018 P4.5 retina AAGGTCTTTA 13.9 0.0139 P4.5 retina TGGTGGAATG 7.9 0.0079 P4.5 retina AAATATTCCA 2 0.002 P4.5 retina CCATCCAGTG 2 0.002 P6.5 retina AAGGTCTTTA 20 0.02 P6.5 retina AAATATTCCA 8.3 0.0083 P10.5 crx- retina AAGGTCTTTA 7.4 0.0074 P10.5 crx- retina AAATATTCCA 1.9 0.0019 P10.5 crx+ retina AAATATTCCA 7.7 0.0077 P10.5 crx+ retina AAGGTCTTTA 1.9 0.0019 P10.5 crx+ retina TGGTGGAATG 1.9 0.0019 Adult retinal AAGGTCTTTA 3.7 0.0037 Adult retinal CCATCCAGTG 1.9 0.0019 Adult retinal GCAGGGGGCA 1.9 0.0019 ONL AAATATTCCA 3.8 0.0038 ONL AAGGTCTTTA 1.9 0.0019