Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29914	Cbfa2t2h	core-binding factor, runt domain, alpha subunit 2, translocated to, 2 homolog (human)	2		12396
Gene Ontology	nucleus | regulation of transcription, DNA-dependent | transcription factor activity
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 91 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCTCTGCAT (29) 8.2 0.0082 P8 Cb GC CCTTTAATCT (38) 4.9 0.0049 P8 Cb GC CCACCCCTCC (5) 1.6 0.0016 P8 Cb GC GAATAACCTG 1.6 0.0016 P8 Cb GC GTTTGCAGAG (3) 1.6 0.0016 Cb medulloblastoma GCCTCTGCAT (29) 6.9 0.0069 Cb medulloblastoma GTTTGCAAAA (4) 2.3 0.0023 P8 GC+1d culture GCCTCTGCAT (29) 20.5 0.0205 P8 GC+1d culture CCACCCCTCC (5) 1.1 0.0011 P8 GC+1d culture CCTTTAATCT (38) 1.1 0.0011 P8 GC+1d culture GAATAAACTG (2) 1.1 0.0011 P8 GC+1d culture TCTGGATCCT (3) 1.1 0.0011 P8 GC+1d culture TTATTTTAGC (4) 1.1 0.0011 P8 GC+SHH+1d culture GCCTCTGCAT (29) 9.4 0.0094 P8 GC+SHH+1d culture GTTTGCAAAA (4) 7 0.007 P8 GC+SHH+1d culture CCTTTAATCT (38) 3.5 0.0035 P8 GC+SHH+1d culture GTTTGCAGAG (3) 2.3 0.0023 P8 GC+SHH+1d culture TCTGGATCCT (3) 2.3 0.0023 P8 GC+SHH+1d culture AGAATGTCTC (2) 1.2 0.0012 P8 GC+SHH+1d culture GTGGCACATA (5) 1.2 0.0012 P8 GC+SHH+1d culture TTATTTTAGC (4) 1.2 0.0012 3T3 fibroblasts CCTTTAATCT (38) 10.5 0.0105 3T3 fibroblasts GCCTCTGCAT (29) 7 0.007 3T3 fibroblasts CCACCCCTCC (5) 3.5 0.0035 3T3 fibroblasts GTGGCACATA (5) 3.5 0.0035 E15 cortex GCCTCTGCAT (29) 39.6 0.0396 E15 cortex CCACCCCTCC (5) 4.9 0.0049 E15 cortex GAAATGGAAA (8) 4.9 0.0049 E15 cortex GTGGCACATA (5) 4.9 0.0049 P1 cortex GCCTCTGCAT (29) 18.2 0.0182 P1 cortex CCTTTAATCT (38) 4.5 0.0045 P1 cortex GCTTCCTGAG (2) 4.5 0.0045 P1 cortex GTTTGCAGAG (3) 4.5 0.0045 Hypothalamus GCCTCTGCAT (29) 10.9 0.0109 Hypothalamus CCTTTAATCT (38) 1.8 0.0018 E12.5 retina GCCTCTGCAT (29) 11.3 0.0113 E12.5 retina CCTTTAATCT (38) 1.9 0.0019 E14.5 retina GCCTCTGCAT (29) 14.6 0.0146 E14.5 retina CCTTTAATCT (38) 12.8 0.0128 E14.5 retina GTTTGCAGAG (3) 5.5 0.0055 E14.5 retina AGAATGTCTC (2) 1.8 0.0018 E14.5 retina GAATAAACTG (2) 1.8 0.0018 E14.5 retina GTGGCACATA (5) 1.8 0.0018 E16.5 retina GCCTCTGCAT (29) 16.3 0.0163 E16.5 retina GTGGCACATA (5) 3.6 0.0036 E16.5 retina CCACCCCTCC (5) 1.8 0.0018 E18.5 retina GCCTCTGCAT (29) 9.1 0.0091 E18.5 retina TTATTTTAGC (4) 3.6 0.0036 P0.5 retina GCCTCTGCAT (29) 23.6 0.0236 P0.5 retina GTTTGCAGAG (3) 5.9 0.0059 P0.5 retina CCTTTAATCT (38) 2 0.002 P0.5 retina GAATAACCTG 2 0.002 P2.5 retina GCCTCTGCAT (29) 31.7 0.0317 P2.5 retina GTTTGCAGAG (3) 5.3 0.0053 P2.5 retina CCACCCCTCC (5) 3.5 0.0035 P2.5 retina CCTTTAATCT (38) 3.5 0.0035 P2.5 retina GAATAACCTG 3.5 0.0035 P2.5 retina TTATTTTAGC (4) 3.5 0.0035 P2.5 retina GCTTCCTGAG (2) 1.8 0.0018 P2.5 retina GTTTGCAAAA (4) 1.8 0.0018 P4.5 retina GCCTCTGCAT (29) 19.8 0.0198 P4.5 retina GTTTGCAGAG (3) 5.9 0.0059 P4.5 retina CCTTTAATCT (38) 4 0.004 P4.5 retina GAATAACCTG 2 0.002 P4.5 retina GCCACAGTCC 2 0.002 P4.5 retina TTATTTTAGC (4) 2 0.002 P6.5 retina GCCTCTGCAT (29) 21.7 0.0217 P6.5 retina CCTTTAATCT (38) 11.7 0.0117 P6.5 retina GAAATGGAAA (8) 1.7 0.0017 P6.5 retina GTGGCACATA (5) 1.7 0.0017 P6.5 retina GTTTGCAGAG (3) 1.7 0.0017 P6.5 retina TCTGGATCCT (3) 1.7 0.0017 P10.5 crx- retina GCCTCTGCAT (29) 27.9 0.0279 P10.5 crx- retina GTTTGCAGAG (3) 11.1 0.0111 P10.5 crx- retina GAAATGGAAA (8) 1.9 0.0019 P10.5 crx- retina GAATAACCTG 1.9 0.0019 P10.5 crx- retina GCCACAGTCC 1.9 0.0019 P10.5 crx- retina GTTTGCAAAA (4) 1.9 0.0019 P10.5 crx+ retina GCCTCTGCAT (29) 32.7 0.0327 P10.5 crx+ retina GTGGCACATA (5) 3.8 0.0038 P10.5 crx+ retina AGAATGTCTC (2) 1.9 0.0019 P10.5 crx+ retina GTTTGCAGAG (3) 1.9 0.0019 Adult retinal GCCTCTGCAT (29) 33.3 0.0333 Adult retinal CCTTTAATCT (38) 7.4 0.0074 Adult retinal GCTTCCTGAG (2) 1.9 0.0019 Adult retinal GTGGCACATA (5) 1.9 0.0019 ONL GCCTCTGCAT (29) 17.2 0.0172 ONL CCTTTAATCT (38) 11.5 0.0115 ONL GTGGCACATA (5) 3.8 0.0038 ONL AGAATGTCTC (2) 1.9 0.0019 ONL GCCACAGTCC 1.9 0.0019