| Library | Tag (Other Genes) | Normalized Count | % in library | 
| P8 Cb GC | CTCATTCAGC (3) GCCGACGAGA (3)
 TAGGGCAATC (3)
 
 | 122.4 | 0.1224 | 
| Cb medulloblastoma | TAGGGCAATC (3) TAGGGCAATT (2)
 
 | 71.7 | 0.0717 | 
| P8 GC+1d culture | TAGGGCAATC (3) 
 | 69.6 | 0.0696 | 
| P8 GC+SHH+1d culture | AGATGGAGAT (2) CTCATTCAGC (3)
 GCCGACGAGA (3)
 TAGGGCAATC (3)
 TAGGGCAATT (2)
 
 | 80.8 | 0.0808 | 
| 3T3 fibroblasts | TAGGGCAATC (3) 
 | 14 | 0.014 | 
| E15 cortex | GCCGACGAGA (3) TAGGGCAATC (3)
 
 | 29.6 | 0.0296 | 
| P1 cortex | AGATGGAGAT (2) TAGGGCAATC (3)
 
 | 18.1 | 0.0181 | 
| Hypothalamus | TAGGGCAATC (3) 
 | 29 | 0.029 | 
| E12.5 retina | TAGGGCAATC (3) 
 | 107 | 0.107 | 
| E14.5 retina | TAGGGCAATC (3) 
 | 94.7 | 0.0947 | 
| E16.5 retina | AGATGGAGAT (2) CTCATTCAGC (3)
 GCCGACGAGA (3)
 TAGGGCAATC (3)
 
 | 85.1 | 0.0851 | 
| E18.5 retina | GCGAGCGCCG (3) TAGGGCAATC (3)
 TAGGGCAATT (2)
 
 | 136.4 | 0.1364 | 
| P0.5 retina | TAGGGCAATC (3) 
 | 94.2 | 0.0942 | 
| P2.5 retina | CTCATTCAGC (3) TAGGGCAATC (3)
 
 | 96.8 | 0.0968 | 
| P4.5 retina | GCGAGCGCCG (3) TAGGGCAATC (3)
 TAGGGCAATT (2)
 
 | 111 | 0.111 | 
| P6.5 retina | TAGGGCAATC (3) 
 | 71.7 | 0.0717 | 
| P10.5 crx- retina | AGATGGAGAT (2) CTCATTCAGC (3)
 GCCGACGAGA (3)
 GCGAGCGCCG (3)
 TAGGGCAATC (3)
 
 | 107.9 | 0.1079 | 
| P10.5 crx+ retina | CTCATTCAGC (3) GCCGACGAGA (3)
 TAGGGCAATC (3)
 
 | 84.5 | 0.0845 | 
| Adult retinal | GCGAGCGCCG (3) TAGGGCAATC (3)
 
 | 31.5 | 0.0315 | 
| ONL | CTCATTCAGC (3) GCCGACGAGA (3)
 TAGGGCAATC (3)
 
 | 26.8 | 0.0268 |