Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.299254	3110037L02Rik	RIKEN cDNA 3110037L02 gene	8		73145
Mm.299254	Pard3	par-3 (partitioning defective 3) homolog (C. elegans)	8	8 67.0 cM	93742
Gene Ontology	adherens junction | cell cycle | cell-cell adherens junction | cell-cell adhesion | membrane | protein binding | tight junction
Human Homolog	PARD3[par-3 partitioning defective 3 homolog (C. elegans)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 54 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGCAATGAAA (3) 1.6 0.0016 P8 Cb GC AGTCCTATTT (3) 1.6 0.0016 P8 Cb GC TATTAACAAA (4) 1.6 0.0016 P8 Cb GC TTTCTGCTTT (5) 1.6 0.0016 Cb medulloblastoma AGCAATGAAA (3) 2.3 0.0023 Cb medulloblastoma CCCAGCTTTT (11) 2.3 0.0023 Cb medulloblastoma TACCGGGTGT (2) 2.3 0.0023 P8 GC+1d culture AGCAATGAAA (3) 3.4 0.0034 P8 GC+1d culture TAAATTCATC (2) 1.1 0.0011 P8 GC+1d culture TACCGGGTGT (2) 1.1 0.0011 P8 GC+1d culture TATTAACAAA (4) 1.1 0.0011 P8 GC+1d culture TCTTTTTTTT (12) 1.1 0.0011 P8 GC+SHH+1d culture TAAATTCATC (2) 1.2 0.0012 P8 GC+SHH+1d culture TTTCTGCTTT (5) 1.2 0.0012 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex TTCCCGCTGT (2) 4.5 0.0045 Hypothalamus AGCAATGAAA (3) 3.6 0.0036 Hypothalamus CCCAGCTTTT (11) 1.8 0.0018 Hypothalamus TTCCCGCTGT (2) 1.8 0.0018 E12.5 retina AGCAATGAAA (3) 3.8 0.0038 E12.5 retina TAAATTCATC (2) 1.9 0.0019 E12.5 retina TATTAACAAA (4) 1.9 0.0019 E14.5 retina TAAATTCATC (2) 1.8 0.0018 E16.5 retina AGCAATGAAA (3) 1.8 0.0018 E16.5 retina TTCCCGCTGT (2) 1.8 0.0018 E16.5 retina TTTCTGCTTT (5) 1.8 0.0018 E18.5 retina CCCAGCTTTT (11) 1.8 0.0018 E18.5 retina TAAATTCATC (2) 1.8 0.0018 E18.5 retina TTTCTGCTTT (5) 1.8 0.0018 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina AGTCCTATTT (3) 2 0.002 P0.5 retina TAAATTCATC (2) 2 0.002 P2.5 retina AGCAATGAAA (3) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina TTCCCGCTGT (2) 1.8 0.0018 P4.5 retina AGCAATGAAA (3) 2 0.002 P4.5 retina AGTCCTATTT (3) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina TACCGGGTGT (2) 2 0.002 P4.5 retina TATTAACAAA (4) 2 0.002 P6.5 retina AGCAATGAAA (3) 6.7 0.0067 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P10.5 crx- retina AGCAATGAAA (3) 3.7 0.0037 P10.5 crx- retina TCTTTTTTTT (12) 3.7 0.0037 P10.5 crx- retina TTTCTGCTTT (5) 1.9 0.0019 P10.5 crx+ retina AGCAATGAAA (3) 9.6 0.0096 Adult retinal AGCAATGAAA (3) 1.9 0.0019 Adult retinal CCCAGCTTTT (11) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL GTCATAGCTG (590) 5.7 0.0057 ONL AGCAATGAAA (3) 3.8 0.0038 ONL TCTTTTTTTT (12) 3.8 0.0038 ONL TTCCCGCTGT (2) 1.9 0.0019