Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.299381	Hprt1	hypoxanthine guanine phosphoribosyl transferase 1	X	X 17.0 cM	15452
Gene Ontology	behavior | cytolysis | cytoplasm | hypoxanthine phosphoribosyltransferase activity | hypoxanthine phosphoribosyltransferase activity | lymphocyte proliferation | magnesium ion binding | nucleoside metabolism | purine nucleotide biosynthesis | purine salvage | transferase activity | transferase activity, transferring glycosyl groups
Human Homolog	HPRT1[hypoxanthine phosphoribosyltransferase 1 (Lesch-Nyhan syndrome)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 57 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGGAGATGG (7) 9.8 0.0098 P8 Cb GC TTTCAGCAGT 9.8 0.0098 P8 Cb GC TGGCCACGTG (3) 3.3 0.0033 P8 Cb GC TCCGTGGCTG 1.6 0.0016 Cb medulloblastoma TTTCAGCAGT 25.4 0.0254 Cb medulloblastoma TTTCAGCAAA (7) 11.6 0.0116 P8 GC+1d culture TTTCAGCAGT 10.3 0.0103 P8 GC+1d culture TGGCCACGTG (3) 3.4 0.0034 P8 GC+1d culture TTTCAGCAAA (7) 3.4 0.0034 P8 GC+1d culture AAGGAGATGG (7) 2.3 0.0023 P8 GC+1d culture TTTATTCCAC (2) 1.1 0.0011 P8 GC+SHH+1d culture TTTCAGCAGT 12.9 0.0129 P8 GC+SHH+1d culture TGGCCACGTG (3) 3.5 0.0035 P8 GC+SHH+1d culture AAGGAGATGG (7) 1.2 0.0012 P8 GC+SHH+1d culture TTTCAGCAAA (7) 1.2 0.0012 3T3 fibroblasts TTTCAGCAGT 17.5 0.0175 3T3 fibroblasts TGGCCACGTG (3) 3.5 0.0035 E15 cortex TGGCCACGTG (3) 14.8 0.0148 Hypothalamus TTTCAGCAAA (7) 54.3 0.0543 Hypothalamus TTTCAGCAGT 32.6 0.0326 Hypothalamus TGGCCACGTG (3) 7.2 0.0072 Hypothalamus TTTATTCCAC (2) 5.4 0.0054 E12.5 retina TTTCAGCAGT 7.5 0.0075 E12.5 retina TCCGTGGCTG 1.9 0.0019 E14.5 retina TTTCAGCAGT 3.6 0.0036 E16.5 retina TTTCAGCAGT 3.6 0.0036 E16.5 retina AACCTTCTAT (4) 1.8 0.0018 E16.5 retina TTTATTCCAC (2) 1.8 0.0018 E16.5 retina TTTCAGCAAA (7) 1.8 0.0018 E18.5 retina TTTCAGCAGT 23.6 0.0236 E18.5 retina AAGGAGATGG (7) 3.6 0.0036 E18.5 retina TTTCAGCAAA (7) 1.8 0.0018 P0.5 retina TTTCAGCAGT 7.9 0.0079 P0.5 retina TCCGTGGCTG 2 0.002 P0.5 retina TGGCCACGTG (3) 2 0.002 P2.5 retina TTTCAGCAGT 12.3 0.0123 P2.5 retina TTTCAGCAAA (7) 3.5 0.0035 P2.5 retina TGGCCACGTG (3) 1.8 0.0018 P4.5 retina TTTCAGCAGT 5.9 0.0059 P4.5 retina TGGCCACGTG (3) 2 0.002 P4.5 retina TTTCAGCAAA (7) 2 0.002 P6.5 retina TTTCAGCAGT 15 0.015 P6.5 retina TTTCAGCAAA (7) 3.3 0.0033 P6.5 retina AACCTTCTAT (4) 1.7 0.0017 P6.5 retina TGGCCACGTG (3) 1.7 0.0017 P10.5 crx- retina TTTCAGCAGT 29.7 0.0297 P10.5 crx- retina AAGGAGATGG (7) 1.9 0.0019 P10.5 crx- retina TGGCCACGTG (3) 1.9 0.0019 P10.5 crx+ retina TTTCAGCAGT 28.8 0.0288 P10.5 crx+ retina AACCTTCTAT (4) 1.9 0.0019 P10.5 crx+ retina TTTCAGCAAA (7) 1.9 0.0019 Adult retinal TTTCAGCAGT 37 0.037 Adult retinal TTTCAGCAAA (7) 7.4 0.0074 Adult retinal TGGCCACGTG (3) 1.9 0.0019 ONL TTTCAGCAGT 21.1 0.0211 ONL AACCTTCTAT (4) 3.8 0.0038 ONL TTTCAGCAAA (7) 3.8 0.0038