Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.299442
Iqsec3
IQ motif and Sec7 domain 3
6
243621
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 28 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCCACCAGCA (
4
)
GAGAGCCTGC (
2
)
TCCACTCTCC
(
2
)
4.8
0.0048
Cb medulloblastoma
CCCACCAGCA (
4
)
2.3
0.0023
P8 GC+1d culture
GAGAGCCTGC (
2
)
3.4
0.0034
P8 GC+SHH+1d culture
GAGAGCCTGC (
2
)
3.5
0.0035
3T3 fibroblasts
GAGAGCCTGC (
2
)
3.5
0.0035
E15 cortex
TCCACTCTCC
(
2
)
4.9
0.0049
E12.5 retina
GAACATCCCT
1.9
0.0019
E14.5 retina
GAGAGCCTGC (
2
)
3.6
0.0036
E16.5 retina
CCCACCAGCA (
4
)
1.8
0.0018
E18.5 retina
GAACATCCCT
1.8
0.0018
P0.5 retina
GAACATCCCT
GAGAGCCTGC (
2
)
TCCACTCTCC
(
2
)
13.8
0.0138
P4.5 retina
GAGAGCCTGC (
2
)
2
0.002
P6.5 retina
AAATACCTGA
GAACATCCCT
GAGAGCCTGC (
2
)
11.7
0.0117
P10.5 crx- retina
AAATACCTGA
GAGAGCCTGC (
2
)
55.7
0.0557
P10.5 crx+ retina
AAATACCTGA
GAACATCCCT
23
0.023
Adult retinal
AAATACCTGA
GAACATCCCT
GAGAGCCTGC (
2
)
TCCACTCTCC
(
2
)
16.7
0.0167
ONL
AAATACCTGA
15.3
0.0153
