Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29945	Edf1	endothelial differentiation-related factor 1	2		59022
Gene Ontology	DNA binding
Human Homolog	EDF1[endothelial differentiation-related factor 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 50 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTCCCCACCC (8) 22.8 0.0228 P8 Cb GC GTCAAACGGA 16.3 0.0163 Cb medulloblastoma GTCAAACGGA 27.7 0.0277 Cb medulloblastoma TTCCCCACCC (8) 9.2 0.0092 P8 GC+1d culture GTCAAACGGA 40 0.04 P8 GC+1d culture TTCCCCACCC (8) 36.5 0.0365 P8 GC+1d culture TGAGGAGACC (3) 1.1 0.0011 P8 GC+SHH+1d culture TTCCCCACCC (8) 32.8 0.0328 P8 GC+SHH+1d culture GTCAAACGGA 17.6 0.0176 3T3 fibroblasts GTCAAACGGA 17.5 0.0175 3T3 fibroblasts TTCCCCACCC (8) 10.5 0.0105 3T3 fibroblasts TGAGGAGACC (3) 3.5 0.0035 E15 cortex TTCCCCACCC (8) 39.6 0.0396 E15 cortex GTCAAACGGA 19.8 0.0198 E15 cortex TCTTTGGAGA (3) 4.9 0.0049 P1 cortex TTCCCCACCC (8) 22.7 0.0227 Hypothalamus TTCCCCACCC (8) 10.9 0.0109 Hypothalamus GTCAAACGGA 1.8 0.0018 Hypothalamus TCTTTGGAGA (3) 1.8 0.0018 Hypothalamus TGAGGAGACC (3) 1.8 0.0018 E12.5 retina TTCCCCACCC (8) 28.2 0.0282 E12.5 retina GTCAAACGGA 18.8 0.0188 E12.5 retina GATTTCCGTG (2) 1.9 0.0019 E14.5 retina TTCCCCACCC (8) 20 0.02 E16.5 retina TTCCCCACCC (8) 29 0.029 E16.5 retina GTCAAACGGA 5.4 0.0054 E16.5 retina TCTTTGGAGA (3) 1.8 0.0018 E18.5 retina TTCCCCACCC (8) 61.8 0.0618 E18.5 retina GTCAAACGGA 20 0.02 P0.5 retina TTCCCCACCC (8) 82.4 0.0824 P0.5 retina GTCAAACGGA 7.9 0.0079 P0.5 retina GTCAAACGGG (3) 3.9 0.0039 P0.5 retina TGAGGAGACC (3) 2 0.002 P2.5 retina TTCCCCACCC (8) 70.4 0.0704 P2.5 retina GTCAAACGGA 5.3 0.0053 P4.5 retina TTCCCCACCC (8) 61.4 0.0614 P4.5 retina GTCAAACGGA 5.9 0.0059 P4.5 retina GATTTCCGTG (2) 2 0.002 P4.5 retina GTCAAACGGG (3) 2 0.002 P6.5 retina TTCCCCACCC (8) 46.7 0.0467 P6.5 retina GTCAAACGGA 13.3 0.0133 P10.5 crx- retina GTCAAACGGA 20.4 0.0204 P10.5 crx- retina TTCCCCACCC (8) 7.4 0.0074 P10.5 crx+ retina TTCCCCACCC (8) 19.2 0.0192 P10.5 crx+ retina GTCAAACGGA 5.8 0.0058 P10.5 crx+ retina GATTTCCGTG (2) 1.9 0.0019 Adult retinal GTCAAACGGA 13 0.013 Adult retinal TTCCCCACCC (8) 13 0.013 ONL TTCCCCACCC (8) 9.6 0.0096 ONL GTCAAACGGA 5.7 0.0057