Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.299774	Jup	junction plakoglobin	11	11 60.0 cM	16480
Gene Ontology	cell adhesion | cell-cell adherens junction | cytoskeleton | cytosol | desmosome | intercellular junction | protein binding | structural molecule activity
Human Homolog	JUP[junction plakoglobin] | JUP[junction plakoglobin]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 24 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGTTTGGGGG 3.3 0.0033 Cb medulloblastoma GGTTTGGGGG 2.3 0.0023 P8 GC+1d culture CTGGCCTAGC GGTTTGGGGG TGCAGGAGGT 12.5 0.0125 P8 GC+SHH+1d culture GGTTTGGGGG TGCAGGAGGT 7 0.007 E15 cortex GCTGGCCTAG 4.9 0.0049 E14.5 retina GCTGGCCTAG TGCAGGAGGT 5.4 0.0054 E16.5 retina GGTTTGGGGG 7.2 0.0072 E18.5 retina GCTGGCCTAG GGTTTGGGGG TGCAGGAGGT 5.4 0.0054 P0.5 retina GGTTTGGGGG 2 0.002 P2.5 retina GGTTTGGGGG 7 0.007 P4.5 retina CTGGCCTAGC GGTTTGGGGG 4 0.004 P6.5 retina GGTTTGGGGG 5 0.005 P10.5 crx- retina CTGGCCTAGC 1.9 0.0019 P10.5 crx+ retina GGTTTGGGGG 5.8 0.0058 Adult retinal CTGGCCTAGC GGTTTGGGGG 5.6 0.0056 ONL GCTGGCCTAG 1.9 0.0019