Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2999	Smc2l1	SMC2 structural maintenance of chromosomes 2-like 1 (yeast)	4	4 18.5 cM	14211
Gene Ontology	ATP binding | ATPase activity, coupled to transmembrane movement of substances | cell cycle | chromosome segregation | membrane | mitosis | mitotic chromosome condensation | nucleus | transport
Human Homolog	SMC2L1[SMC2 structural maintenance of chromosomes 2-like 1 (yeast)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 35 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTAAAAAAAA (2) 11.4 0.0114 P8 Cb GC TCTCACAGAA 3.3 0.0033 Cb medulloblastoma CTAAAAAAAA (2) 39.3 0.0393 P8 GC+1d culture CTAAAAAAAA (2) 19.4 0.0194 P8 GC+1d culture TTTCGTCCTG 2.3 0.0023 P8 GC+SHH+1d culture CTAAAAAAAA (2) 41 0.041 P8 GC+SHH+1d culture TTTTTGCTTT 7 0.007 P8 GC+SHH+1d culture ATAAAGAAAA (2) 1.2 0.0012 P8 GC+SHH+1d culture TTTCGTCCTG 1.2 0.0012 E15 cortex CTAAAAAAAA (2) 14.8 0.0148 P1 cortex CTAAAAAAAA (2) 4.5 0.0045 Hypothalamus CTAAAAAAAA (2) 16.3 0.0163 E12.5 retina CTAAAAAAAA (2) 11.3 0.0113 E14.5 retina CTAAAAAAAA (2) 12.8 0.0128 E14.5 retina TCTCACAGAA 3.6 0.0036 E14.5 retina ATAAAGAAAA (2) 1.8 0.0018 E16.5 retina CTAAAAAAAA (2) 5.4 0.0054 E16.5 retina TCTCACAGAA 1.8 0.0018 E16.5 retina TTTTTGCTTT 1.8 0.0018 E18.5 retina CTAAAAAAAA (2) 20 0.02 P0.5 retina CTAAAAAAAA (2) 5.9 0.0059 P0.5 retina TCTCACAGAA 2 0.002 P2.5 retina CTAAAAAAAA (2) 15.8 0.0158 P2.5 retina ATAAAGAAAA (2) 3.5 0.0035 P2.5 retina TCTCACAGAA 3.5 0.0035 P4.5 retina CTAAAAAAAA (2) 29.7 0.0297 P6.5 retina CTAAAAAAAA (2) 13.3 0.0133 P6.5 retina TCTCACAGAA 1.7 0.0017 P10.5 crx- retina CTAAAAAAAA (2) 5.6 0.0056 P10.5 crx- retina TTTCGTCCTG 1.9 0.0019 P10.5 crx+ retina CTAAAAAAAA (2) 7.7 0.0077 Adult retinal CTAAAAAAAA (2) 5.6 0.0056 Adult retinal ATAAAGAAAA (2) 1.9 0.0019 ONL CTAAAAAAAA (2) 1.9 0.0019 ONL TCTCACAGAA 1.9 0.0019