Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.300	BB219044	expressed sequence BB219044	3		99954
Mm.300	Car3	carbonic anhydrase 3	3	3 11.7 cM	12350
Gene Ontology	carbonate dehydratase activity | lyase activity | one-carbon compound metabolism | zinc ion binding
Human Homolog	CA3[carbonic anhydrase III, muscle specific]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 75 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCAATCTGAT (2) 29.4 0.0294 P8 Cb GC GGTTTGTTTT (7) 4.9 0.0049 P8 Cb GC CCTGGTTCCC (8) 1.6 0.0016 P8 Cb GC GACTGTGAGC (4) 1.6 0.0016 P8 Cb GC GAGGAACAGC (7) 1.6 0.0016 Cb medulloblastoma GCAATCTGAT (2) 46.2 0.0462 Cb medulloblastoma GAGGAACAGC (7) 4.6 0.0046 Cb medulloblastoma GGTTTGTTTT (7) 4.6 0.0046 Cb medulloblastoma CTTCTGGGTG (5) 2.3 0.0023 P8 GC+1d culture GCAATCTGAT (2) 33.1 0.0331 P8 GC+1d culture GGTTTGTTTT (7) 5.7 0.0057 P8 GC+1d culture CTTCTGGGTG (5) 1.1 0.0011 P8 GC+1d culture GACTGTGAGC (4) 1.1 0.0011 P8 GC+1d culture GAGGAACAGC (7) 1.1 0.0011 P8 GC+SHH+1d culture GCAATCTGAT (2) 51.5 0.0515 P8 GC+SHH+1d culture GGTTTGTTTT (7) 4.7 0.0047 P8 GC+SHH+1d culture CGTATTACAG (2) 2.3 0.0023 P8 GC+SHH+1d culture CTTCTGGGTG (5) 2.3 0.0023 P8 GC+SHH+1d culture GACTGTGAGC (4) 1.2 0.0012 3T3 fibroblasts GCAATCTGAT (2) 42.1 0.0421 E15 cortex GAGGAACAGC (7) 14.8 0.0148 E15 cortex GGTTTGTTTT (7) 9.9 0.0099 E15 cortex GCAATCTGAT (2) 4.9 0.0049 P1 cortex GCAATCTGAT (2) 13.6 0.0136 Hypothalamus GCAATCTGAT (2) 77.9 0.0779 Hypothalamus AAATTTCACA (6) 1.8 0.0018 Hypothalamus CCCTGGTTCC (3) 1.8 0.0018 Hypothalamus GACTGTGAGC (4) 1.8 0.0018 E12.5 retina GCAATCTGAT (2) 107 0.107 E12.5 retina GAGGAACAGC (7) 3.8 0.0038 E12.5 retina CCTGGTTCCC (8) 1.9 0.0019 E14.5 retina GCAATCTGAT (2) 98.4 0.0984 E14.5 retina CCCTGGTTCC (3) 1.8 0.0018 E16.5 retina GCAATCTGAT (2) 157.6 0.1576 E16.5 retina CCCTGGTTCC (3) 3.6 0.0036 E18.5 retina GCAATCTGAT (2) 231 0.231 E18.5 retina GGTTTGTTTT (7) 5.5 0.0055 E18.5 retina CCCTGGTTCC (3) 3.6 0.0036 E18.5 retina GACTGTGAGC (4) 3.6 0.0036 P0.5 retina GCAATCTGAT (2) 43.2 0.0432 P0.5 retina CATCTAGAGG (11) 25.5 0.0255 P0.5 retina CCTGGTTCCC (8) 2 0.002 P0.5 retina GACTGTGAGC (4) 2 0.002 P0.5 retina GAGGAACAGC (7) 2 0.002 P0.5 retina GGTTTGTTTT (7) 2 0.002 P2.5 retina GCAATCTGAT (2) 132 0.132 P2.5 retina GGTTTGTTTT (7) 3.5 0.0035 P2.5 retina CATCTAGAGG (11) 1.8 0.0018 P2.5 retina CGTATTACAG (2) 1.8 0.0018 P2.5 retina GACTGTGAGC (4) 1.8 0.0018 P4.5 retina GCAATCTGAT (2) 136.7 0.1367 P4.5 retina GACTGTGAGC (4) 7.9 0.0079 P4.5 retina CCCTGGTTCC (3) 4 0.004 P4.5 retina CCTGGTTCCC (8) 4 0.004 P4.5 retina CATCTAGAGG (11) 2 0.002 P4.5 retina GGTTTGTTTT (7) 2 0.002 P6.5 retina GCAATCTGAT (2) 86.7 0.0867 P6.5 retina GGTTTGTTTT (7) 5 0.005 P6.5 retina GGATCCCCTG (4) 1.7 0.0017 P10.5 crx- retina GCAATCTGAT (2) 52 0.052 P10.5 crx- retina GGATCCCCTG (4) 1.9 0.0019 P10.5 crx- retina GGTTTGTTTT (7) 1.9 0.0019 P10.5 crx+ retina GCAATCTGAT (2) 92.3 0.0923 P10.5 crx+ retina CATCTAGAGG (11) 1.9 0.0019 P10.5 crx+ retina CCCTGGTTCC (3) 1.9 0.0019 Adult retinal GCAATCTGAT (2) 83.3 0.0833 Adult retinal CATCTAGAGG (11) 7.4 0.0074 Adult retinal GGATCCCCTG (4) 5.6 0.0056 Adult retinal CTTCTGGGTG (5) 1.9 0.0019 Adult retinal GAGGAACAGC (7) 1.9 0.0019 ONL GCAATCTGAT (2) 34.5 0.0345 ONL AAATTTCACA (6) 3.8 0.0038 ONL GACTGTGAGC (4) 1.9 0.0019 ONL GGATCCCCTG (4) 1.9 0.0019 ONL GGTTTGTTTT (7) 1.9 0.0019