Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.30008	D10Ertd322e	DNA segment, Chr 10, ERATO Doi 322, expressed	10	10 39.0 cM	67270
Gene Ontology	mitochondrion | structural constituent of ribosome
Human Homolog	MRPL42[mitochondrial ribosomal protein L42]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 74 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAAAAAAAA (196) 47.3 0.0473 P8 Cb GC TCAAAAAAAA (60) 17.9 0.0179 P8 Cb GC GAGCAGAGGA (8) 1.6 0.0016 P8 Cb GC GGCCCTTGCC (5) 1.6 0.0016 P8 Cb GC TCAAACACAA (6) 1.6 0.0016 P8 Cb GC TTCTGTGCTG (4) 1.6 0.0016 Cb medulloblastoma TAAAAAAAAA (196) 106.4 0.1064 Cb medulloblastoma TCAAAAAAAA (60) 99.4 0.0994 Cb medulloblastoma GGCCCTTGCC (5) 2.3 0.0023 Cb medulloblastoma TAAACATCAA (2) 2.3 0.0023 P8 GC+1d culture TAAAAAAAAA (196) 66.2 0.0662 P8 GC+1d culture TCAAAAAAAA (60) 17.1 0.0171 P8 GC+1d culture GAGCAGAGGA (8) 6.8 0.0068 P8 GC+1d culture TAAACATCAA (2) 1.1 0.0011 P8 GC+SHH+1d culture TAAAAAAAAA (196) 93.7 0.0937 P8 GC+SHH+1d culture TCAAAAAAAA (60) 51.5 0.0515 P8 GC+SHH+1d culture GAGCAGAGGA (8) 2.3 0.0023 P8 GC+SHH+1d culture TTCTGTGCTG (4) 2.3 0.0023 P8 GC+SHH+1d culture TATCCAAGTG 1.2 0.0012 3T3 fibroblasts TAAAAAAAAA (196) 7 0.007 3T3 fibroblasts TCAAAAAAAA (60) 7 0.007 E15 cortex TCAAAAAAAA (60) 14.8 0.0148 E15 cortex TAAAAAAAAA (196) 9.9 0.0099 E15 cortex GGCCCTTGCC (5) 4.9 0.0049 E15 cortex TTCTGTGCTG (4) 4.9 0.0049 P1 cortex TAAAAAAAAA (196) 50 0.05 P1 cortex TCAAAAAAAA (60) 22.7 0.0227 Hypothalamus TCAAAAAAAA (60) 39.8 0.0398 Hypothalamus TAAAAAAAAA (196) 32.6 0.0326 Hypothalamus GAGCAGAGGA (8) 1.8 0.0018 Hypothalamus TAAACATCAA (2) 1.8 0.0018 E12.5 retina TAAAAAAAAA (196) 24.4 0.0244 E12.5 retina TCAAAAAAAA (60) 18.8 0.0188 E12.5 retina GAGCAGAGGA (8) 3.8 0.0038 E12.5 retina GTACCATCAT 1.9 0.0019 E14.5 retina TAAAAAAAAA (196) 41.9 0.0419 E14.5 retina TCAAAAAAAA (60) 41.9 0.0419 E16.5 retina TAAAAAAAAA (196) 23.5 0.0235 E16.5 retina TCAAAAAAAA (60) 18.1 0.0181 E16.5 retina GGCCCTTGCC (5) 1.8 0.0018 E16.5 retina TAAACATCAA (2) 1.8 0.0018 E16.5 retina TTCTGTGCTG (4) 1.8 0.0018 E18.5 retina TAAAAAAAAA (196) 107.3 0.1073 E18.5 retina TCAAAAAAAA (60) 49.1 0.0491 E18.5 retina GTACCATCAT 1.8 0.0018 E18.5 retina TTCTGTGCTG (4) 1.8 0.0018 P0.5 retina TAAAAAAAAA (196) 37.3 0.0373 P0.5 retina TCAAAAAAAA (60) 31.4 0.0314 P0.5 retina GGCCCTTGCC (5) 2 0.002 P2.5 retina TAAAAAAAAA (196) 72.2 0.0722 P2.5 retina TCAAAAAAAA (60) 35.2 0.0352 P2.5 retina GGCCCTTGCC (5) 1.8 0.0018 P2.5 retina TCAAACACAA (6) 1.8 0.0018 P4.5 retina TAAAAAAAAA (196) 122.8 0.1228 P4.5 retina TCAAAAAAAA (60) 37.6 0.0376 P4.5 retina TAAACATCAA (2) 2 0.002 P6.5 retina TAAAAAAAAA (196) 63.4 0.0634 P6.5 retina TCAAAAAAAA (60) 31.7 0.0317 P6.5 retina GAGCAGAGGA (8) 1.7 0.0017 P6.5 retina GTACCATCAT 1.7 0.0017 P6.5 retina TAAACATCAA (2) 1.7 0.0017 P10.5 crx- retina TCAAAAAAAA (60) 14.9 0.0149 P10.5 crx- retina TAAAAAAAAA (196) 9.3 0.0093 P10.5 crx- retina TATCCAAGTG 1.9 0.0019 P10.5 crx- retina TCAAACACAA (6) 1.9 0.0019 P10.5 crx+ retina TAAAAAAAAA (196) 25 0.025 P10.5 crx+ retina TCAAAAAAAA (60) 17.3 0.0173 P10.5 crx+ retina TTCTGTGCTG (4) 1.9 0.0019 Adult retinal TCAAAAAAAA (60) 20.4 0.0204 Adult retinal TAAAAAAAAA (196) 18.5 0.0185 Adult retinal GGCCCTTGCC (5) 3.7 0.0037 Adult retinal GTACCATCAT 1.9 0.0019 ONL TAAAAAAAAA (196) 28.7 0.0287 ONL TCAAAAAAAA (60) 15.3 0.0153