Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.300083	4933434E20Rik	RIKEN cDNA 4933434E20 gene	3		99650
Human Homolog	C1orf43[chromosome 1 open reading frame 43]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 117 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC CCTGTAATCC (34) 6.5 0.0065 P8 Cb GC CTGAAGGGCC (6) 6.5 0.0065 P8 Cb GC AAAAAAAAAC (24) 4.9 0.0049 P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 P8 Cb GC ACTTTCCTAA (2) 3.3 0.0033 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma CCTGTAATCC (34) 11.6 0.0116 Cb medulloblastoma AAAAAAAAAC (24) 4.6 0.0046 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture CTGAAGGGCC (6) 5.7 0.0057 P8 GC+1d culture ACTTTCCTAA (2) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAC (24) 1.1 0.0011 P8 GC+1d culture ATTTGTCTCT (2) 1.1 0.0011 P8 GC+1d culture CCTGTAATCC (34) 1.1 0.0011 P8 GC+1d culture CGCCACCAAT (3) 1.1 0.0011 P8 GC+1d culture GCGGGGAAGG (3) 1.1 0.0011 P8 GC+1d culture TGTAAAGGTT (3) 1.1 0.0011 P8 GC+1d culture TTTTCTGACG 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture CCTGTAATCC (34) 4.7 0.0047 P8 GC+SHH+1d culture CTGAAGGGCC (6) 4.7 0.0047 P8 GC+SHH+1d culture AAAAAAAAAC (24) 3.5 0.0035 P8 GC+SHH+1d culture ATTTGTCTCT (2) 3.5 0.0035 P8 GC+SHH+1d culture CGCCACCAAT (3) 1.2 0.0012 P8 GC+SHH+1d culture TGTAAAGGTT (3) 1.2 0.0012 P8 GC+SHH+1d culture TTTTCTGACG 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts CCTGTAATCC (34) 10.5 0.0105 3T3 fibroblasts CTGAAGGGCC (6) 7 0.007 3T3 fibroblasts ACTTTCCTAA (2) 3.5 0.0035 3T3 fibroblasts ATTTGTCTCT (2) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex CTGAAGGGCC (6) 9.9 0.0099 E15 cortex AAAAAAAAAC (24) 4.9 0.0049 E15 cortex CCTGTAATCC (34) 4.9 0.0049 E15 cortex GCGGGGAAGG (3) 4.9 0.0049 E15 cortex TGTAAAGGTT (3) 4.9 0.0049 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex CCTGTAATCC (34) 13.6 0.0136 P1 cortex AAAAAAAAAC (24) 9.1 0.0091 P1 cortex ACTTTCCTAA (2) 4.5 0.0045 P1 cortex GCGGGGAAGG (3) 4.5 0.0045 P1 cortex TGTAAAGGTT (3) 4.5 0.0045 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus CCTGTAATCC (34) 5.4 0.0054 Hypothalamus AAAAAAAAAC (24) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E12.5 retina ATTTGTCTCT (2) 3.8 0.0038 E12.5 retina CCTGTAATCC (34) 3.8 0.0038 E12.5 retina ACTTTCCTAA (2) 1.9 0.0019 E12.5 retina TCACAATACA 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina CCTGTAATCC (34) 5.5 0.0055 E14.5 retina AAAAAAAAAC (24) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina CTGAAGGGCC (6) 10.9 0.0109 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina CCTGTAATCC (34) 3.6 0.0036 E16.5 retina AAAAAAAAAC (24) 1.8 0.0018 E16.5 retina CGCCACCAAT (3) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 E18.5 retina AAAAAAAAAC (24) 3.6 0.0036 E18.5 retina CTGAAGGGCC (6) 3.6 0.0036 E18.5 retina CCTGTAATCC (34) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina CCTGTAATCC (34) 3.9 0.0039 P0.5 retina CTGAAGGGCC (6) 3.9 0.0039 P0.5 retina ATTTGTCTCT (2) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina TTTTTTTTTT (433) 7 0.007 P2.5 retina AAAAAAAAAC (24) 5.3 0.0053 P2.5 retina CCTGTAATCC (34) 3.5 0.0035 P2.5 retina CTGAAGGGCC (6) 3.5 0.0035 P2.5 retina GCGGGGAAGG (3) 1.8 0.0018 P2.5 retina TTTTCTGACG 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina CCTGTAATCC (34) 5.9 0.0059 P4.5 retina AAAAAAAAAC (24) 2 0.002 P4.5 retina CTGAAGGGCC (6) 2 0.002 P4.5 retina TTTTCTGACG 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina AAAAAAAAAC (24) 5 0.005 P6.5 retina TTTTCTGACG 5 0.005 P6.5 retina CCTGTAATCC (34) 1.7 0.0017 P6.5 retina TCACAATACA 1.7 0.0017 P6.5 retina TGTAAAGGTT (3) 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina CCTGTAATCC (34) 3.7 0.0037 P10.5 crx- retina CTGAAGGGCC (6) 3.7 0.0037 P10.5 crx- retina AAAAAAAAAC (24) 1.9 0.0019 P10.5 crx- retina ACTTTCCTAA (2) 1.9 0.0019 P10.5 crx- retina TCACAATACA 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina CCTGTAATCC (34) 3.8 0.0038 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 P10.5 crx+ retina TTTTCTGACG 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal CTGAAGGGCC (6) 9.3 0.0093 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal CCTGTAATCC (34) 3.7 0.0037 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL CCTGTAATCC (34) 3.8 0.0038 ONL TTTTTTTTTT (433) 3.8 0.0038 ONL ATTTGTCTCT (2) 1.9 0.0019