Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.30013	2010011I20Rik	RIKEN cDNA 2010011I20 gene	2		67017
Gene Ontology	extracellular space | integral to membrane
Human Homolog	C20orf108[chromosome 20 open reading frame 108]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 43 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTCTTGACTT (5) 16.3 0.0163 P8 Cb GC AGGAACTGTA (19) 1.6 0.0016 Cb medulloblastoma TTCTTGACTT (5) 9.2 0.0092 P8 GC+1d culture TTCTTGACTT (5) 26.3 0.0263 P8 GC+1d culture TTTACAATGC 1.1 0.0011 P8 GC+SHH+1d culture TTCTTGACTT (5) 17.6 0.0176 P8 GC+SHH+1d culture TTTACAATGC 2.3 0.0023 P8 GC+SHH+1d culture ACTTAAAAAT (4) 1.2 0.0012 P8 GC+SHH+1d culture AGGAACAGCA (2) 1.2 0.0012 3T3 fibroblasts GATTTTTCCA (4) 17.5 0.0175 3T3 fibroblasts AGGAACAGCA (2) 3.5 0.0035 E15 cortex TTCTTGACTT (5) 4.9 0.0049 P1 cortex AGGAACTGTA (19) 4.5 0.0045 P1 cortex TTCTTGACTT (5) 4.5 0.0045 Hypothalamus TTCTTGACTT (5) 9.1 0.0091 Hypothalamus TTTACAATGT (4) 1.8 0.0018 E12.5 retina TTCTTGACTT (5) 11.3 0.0113 E12.5 retina AGGAACTGTA (19) 1.9 0.0019 E14.5 retina TTCTTGACTT (5) 23.7 0.0237 E14.5 retina AGGAACTGTA (19) 1.8 0.0018 E14.5 retina TTTACAATGT (4) 1.8 0.0018 E16.5 retina TTCTTGACTT (5) 18.1 0.0181 E18.5 retina TTCTTGACTT (5) 14.6 0.0146 E18.5 retina TTTACAATGT (4) 3.6 0.0036 E18.5 retina AGGAACTGTA (19) 1.8 0.0018 P0.5 retina TTCTTGACTT (5) 9.8 0.0098 P0.5 retina TTTACAATGC 2 0.002 P2.5 retina TTCTTGACTT (5) 8.8 0.0088 P2.5 retina AGGAACTGTA (19) 3.5 0.0035 P4.5 retina TTCTTGACTT (5) 13.9 0.0139 P4.5 retina AGGAACAGCA (2) 2 0.002 P6.5 retina TTCTTGACTT (5) 23.3 0.0233 P6.5 retina TTTACAATGT (4) 3.3 0.0033 P6.5 retina ACTTAAAAAT (4) 1.7 0.0017 P6.5 retina AGGAACTGTA (19) 1.7 0.0017 P10.5 crx- retina TTCTTGACTT (5) 13 0.013 P10.5 crx+ retina AGGAACTGTA (19) 3.8 0.0038 P10.5 crx+ retina AGGAACAGCA (2) 1.9 0.0019 P10.5 crx+ retina TTCTTGACTT (5) 1.9 0.0019 P10.5 crx+ retina TTTACAATGT (4) 1.9 0.0019 Adult retinal TTCTTGACTT (5) 9.3 0.0093 ONL AGGAACTGTA (19) 11.5 0.0115 ONL TTCTTGACTT (5) 1.9 0.0019