Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.30016	Arhgdia	Rho GDP dissociation inhibitor (GDI) alpha	11		192662
Gene Ontology	cytoplasm | GTPase activator activity | Rho GDP-dissociation inhibitor activity
Human Homolog	ARHGDIA[Rho GDP dissociation inhibitor (GDI) alpha]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 101 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGCTCTCCCT 3.3 0.0033 P8 Cb GC AAGTACATCC 1.6 0.0016 P8 Cb GC AGGAGGCTCC (2) 1.6 0.0016 P8 Cb GC CTTGCTCGGG (3) 1.6 0.0016 P8 Cb GC GGGAAGGCTG (4) 1.6 0.0016 P8 Cb GC GGGCTTGGGG (3) 1.6 0.0016 Cb medulloblastoma AAGTACATCC 2.3 0.0023 Cb medulloblastoma CCCCACCCTA 2.3 0.0023 Cb medulloblastoma GCAGAACAGG (5) 2.3 0.0023 Cb medulloblastoma GGGAAGGGCT (7) 2.3 0.0023 Cb medulloblastoma TGCAAACAGA (15) 2.3 0.0023 Cb medulloblastoma TGCTCTCCCT 2.3 0.0023 Cb medulloblastoma TGGCCCCACC (4) 2.3 0.0023 P8 GC+1d culture TGCTCTCCCT 24 0.024 P8 GC+1d culture GGGAAGGGCT (7) 3.4 0.0034 P8 GC+1d culture AGGAGGCTCC (2) 1.1 0.0011 P8 GC+1d culture CCCCACCCTA 1.1 0.0011 P8 GC+1d culture CTTACCTCTA 1.1 0.0011 P8 GC+1d culture CTTGCTCGGG (3) 1.1 0.0011 P8 GC+1d culture GCCCCCACCC (5) 1.1 0.0011 P8 GC+SHH+1d culture GGGAAGGGCT (7) 8.2 0.0082 P8 GC+SHH+1d culture TGCTCTCCCT 8.2 0.0082 P8 GC+SHH+1d culture CCCCACCCCT (6) 1.2 0.0012 P8 GC+SHH+1d culture GCAGAACAGG (5) 1.2 0.0012 P8 GC+SHH+1d culture GTCGGGAGCT 1.2 0.0012 P8 GC+SHH+1d culture TGCAAACAGA (15) 1.2 0.0012 3T3 fibroblasts TGCTCTCCCT 49.1 0.0491 3T3 fibroblasts GCAGAACAGG (5) 3.5 0.0035 E15 cortex TGCTCTCCCT 34.6 0.0346 E15 cortex GGGAAGGGCT (7) 14.8 0.0148 E15 cortex CCCCACCCCT (6) 4.9 0.0049 E15 cortex CCCCACCCTA 4.9 0.0049 E15 cortex GCTGCTTCCT (11) 4.9 0.0049 P1 cortex GGGAAGGGCT (7) 9.1 0.0091 P1 cortex TGCTCTCCCT 9.1 0.0091 Hypothalamus GGGAAGGGCT (7) 7.2 0.0072 Hypothalamus TGCTCTCCCT 7.2 0.0072 Hypothalamus CTTGCTCGGG (3) 3.6 0.0036 Hypothalamus CCCCACCCCT (6) 1.8 0.0018 Hypothalamus CCCCACCCTA 1.8 0.0018 Hypothalamus GCAGAACAGG (5) 1.8 0.0018 Hypothalamus GCCCCCACCC (5) 1.8 0.0018 Hypothalamus GGGCTTGGGG (3) 1.8 0.0018 Hypothalamus GTCGGGAGCT 1.8 0.0018 E12.5 retina CTTGCTCGGG (3) 3.8 0.0038 E12.5 retina GGGAGGGGAA (2) 3.8 0.0038 E12.5 retina CCCCACCCTA 1.9 0.0019 E12.5 retina GCAGAACAGG (5) 1.9 0.0019 E12.5 retina GCTGCTTCCT (11) 1.9 0.0019 E12.5 retina GGGAAAGGCT (4) 1.9 0.0019 E14.5 retina GGGAAGGGCT (7) 3.6 0.0036 E14.5 retina TGCAAACAGA (15) 3.6 0.0036 E14.5 retina TGCTCTCCCT 3.6 0.0036 E14.5 retina CTTACCTCTA 1.8 0.0018 E14.5 retina GGGAAAGGCT (4) 1.8 0.0018 E16.5 retina AGGAGGCTCC (2) 3.6 0.0036 E16.5 retina CCCCACCCCT (6) 3.6 0.0036 E16.5 retina GCAGAACAGG (5) 3.6 0.0036 E16.5 retina TGCTCTCCCT 3.6 0.0036 E16.5 retina GGGAAAGGCT (4) 1.8 0.0018 E16.5 retina GGGAGGGGAA (2) 1.8 0.0018 E16.5 retina GGGCTTGGGG (3) 1.8 0.0018 E18.5 retina TGCTCTCCCT 5.5 0.0055 E18.5 retina GCAGAACAGG (5) 1.8 0.0018 E18.5 retina GGGAAGGGCT (7) 1.8 0.0018 E18.5 retina TGGCCCCACC (4) 1.8 0.0018 P0.5 retina TGCTCTCCCT 11.8 0.0118 P0.5 retina GGGAAGGGCT (7) 3.9 0.0039 P0.5 retina CCCCACCCTA 2 0.002 P0.5 retina CTTACCTCTA 2 0.002 P2.5 retina GGGAAGGGCT (7) 8.8 0.0088 P2.5 retina TGCTCTCCCT 7 0.007 P2.5 retina GGGAGGGGAA (2) 3.5 0.0035 P2.5 retina GTGTTCCCAT (2) 1.8 0.0018 P4.5 retina TGCTCTCCCT 4 0.004 P4.5 retina CTTGCTCGGG (3) 2 0.002 P4.5 retina GCAGAACAGG (5) 2 0.002 P4.5 retina GCCCCCACCC (5) 2 0.002 P4.5 retina GGGAAGGGCT (7) 2 0.002 P6.5 retina GCAGAACAGG (5) 3.3 0.0033 P6.5 retina GGGAAGGGCT (7) 1.7 0.0017 P6.5 retina TGCAAACAGA (15) 1.7 0.0017 P10.5 crx- retina GGGAAGGGCT (7) 5.6 0.0056 P10.5 crx- retina CCCCACCCCT (6) 3.7 0.0037 P10.5 crx- retina GTGTTCCCAT (2) 3.7 0.0037 P10.5 crx- retina TGCAAACAGA (15) 3.7 0.0037 P10.5 crx- retina TGCTCTCCCT 3.7 0.0037 P10.5 crx- retina AAGTACATCC 1.9 0.0019 P10.5 crx- retina GGGCTTGGGG (3) 1.9 0.0019 P10.5 crx- retina TGGCCCCACC (4) 1.9 0.0019 P10.5 crx+ retina GCTGCTTCCT (11) 1.9 0.0019 P10.5 crx+ retina GGGAAGGGCT (7) 1.9 0.0019 Adult retinal CTTGCTCGGG (3) 1.9 0.0019 Adult retinal GCAGAACAGG (5) 1.9 0.0019 Adult retinal GGGAAGGCTG (4) 1.9 0.0019 Adult retinal GGGAAGGGCT (7) 1.9 0.0019 Adult retinal GGGAGGGGAA (2) 1.9 0.0019 Adult retinal TGCTCTCCCT 1.9 0.0019 ONL GCAGAACAGG (5) 3.8 0.0038 ONL GGGAAGGCTG (4) 1.9 0.0019 ONL TGGCCCCACC (4) 1.9 0.0019