Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.30028	Vps28	vacuolar protein sorting 28 (yeast)	15		66914
Gene Ontology	cytosol | endosome | endosome transport | protein binding
Human Homolog	VPS28[vacuolar protein sorting 28 (yeast)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 35 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GACGAGATTC (2) 4.9 0.0049 P8 Cb GC GCAATACTGA 1.6 0.0016 Cb medulloblastoma GACGAGATTC (2) 4.6 0.0046 P8 GC+1d culture GACGAGATTC (2) 3.4 0.0034 P8 GC+1d culture GCAATACTGA 2.3 0.0023 P8 GC+SHH+1d culture GACGAGATTC (2) 4.7 0.0047 P8 GC+SHH+1d culture GCAATACTGA 2.3 0.0023 E15 cortex GACGAGATTC (2) 9.9 0.0099 E15 cortex GCCTTTTGCC (4) 4.9 0.0049 Hypothalamus GACGAGATTC (2) 5.4 0.0054 E12.5 retina GCAATACTGA 7.5 0.0075 E12.5 retina GACGAGATTC (2) 1.9 0.0019 E14.5 retina GACGAGATTC (2) 5.5 0.0055 E14.5 retina GCAATACTGA 1.8 0.0018 E14.5 retina GCAGAGCTCT (3) 1.8 0.0018 E16.5 retina GACGAGATTC (2) 5.4 0.0054 E16.5 retina GCAATACTGA 1.8 0.0018 E18.5 retina GACGAGATTC (2) 3.6 0.0036 P0.5 retina GACGAGATTC (2) 5.9 0.0059 P0.5 retina GCCTTTTGCC (4) 2 0.002 P0.5 retina TGGGTGAGGG (8) 2 0.002 P2.5 retina GACGAGATTC (2) 1.8 0.0018 P2.5 retina TGGGTGAGGG (8) 1.8 0.0018 P6.5 retina GCCTTTTGCC (4) 3.3 0.0033 P6.5 retina GACGAGATTC (2) 1.7 0.0017 P6.5 retina GCAGAGCTCT (3) 1.7 0.0017 P10.5 crx- retina GACGAGATTC (2) 14.9 0.0149 P10.5 crx- retina GCAGAGCTCT (3) 1.9 0.0019 P10.5 crx- retina GCCTTTTGCC (4) 1.9 0.0019 P10.5 crx+ retina GACGAGATTC (2) 3.8 0.0038 Adult retinal GACGAGATTC (2) 7.4 0.0074 Adult retinal GCCTTTTGCC (4) 3.7 0.0037 Adult retinal TGGGTGAGGG (8) 1.9 0.0019 ONL GCCTTTTGCC (4) 7.7 0.0077 ONL GACGAGATTC (2) 3.8 0.0038