Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.300404	3110024A21Rik	RIKEN cDNA 3110024A21 gene	4	4 D3	68040
Gene Ontology	DNA binding | nucleic acid binding | nucleus | regulation of transcription, DNA-dependent | zinc ion binding
Human Homolog	ZNF593[zinc finger protein 593]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 10 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 42 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGAAAAAAAA (81) 27.7 0.0277 Cb medulloblastoma TGAAAAAAAA (81) 78.6 0.0786 Cb medulloblastoma TAGGCCAAGT (5) 2.3 0.0023 P8 GC+1d culture TGAAAAAAAA (81) 26.3 0.0263 P8 GC+1d culture GGCAGTGGTT (2) 1.1 0.0011 P8 GC+1d culture TAGGCCAAGT (5) 1.1 0.0011 P8 GC+SHH+1d culture TGAAAAAAAA (81) 57.4 0.0574 P8 GC+SHH+1d culture TAGGCCAAGT (5) 1.2 0.0012 3T3 fibroblasts TGAAAAAAAA (81) 7 0.007 E15 cortex TGAAAAAAAA (81) 29.7 0.0297 P1 cortex TGAAAAAAAA (81) 4.5 0.0045 Hypothalamus TGAAAAAAAA (81) 36.2 0.0362 Hypothalamus GGCAGTGGTT (2) 1.8 0.0018 E12.5 retina TGAAAAAAAA (81) 31.9 0.0319 E12.5 retina GGCAGTGGTT (2) 1.9 0.0019 E14.5 retina TGAAAAAAAA (81) 49.2 0.0492 E14.5 retina GGCAGTGGTT (2) 1.8 0.0018 E16.5 retina TGAAAAAAAA (81) 16.3 0.0163 E16.5 retina GGCAGTGGTT (2) 9.1 0.0091 E16.5 retina TAGGCCAAGT (5) 1.8 0.0018 E18.5 retina TGAAAAAAAA (81) 74.6 0.0746 P0.5 retina TGAAAAAAAA (81) 15.7 0.0157 P0.5 retina TAGGCCAAGT (5) 2 0.002 P2.5 retina TGAAAAAAAA (81) 42.2 0.0422 P2.5 retina GGCAGTGGTT (2) 8.8 0.0088 P4.5 retina TGAAAAAAAA (81) 43.6 0.0436 P4.5 retina GCTGACAGTG (5) 2 0.002 P6.5 retina TGAAAAAAAA (81) 33.3 0.0333 P6.5 retina GCTGACAGTG (5) 1.7 0.0017 P6.5 retina GGCAGTGGTT (2) 1.7 0.0017 P6.5 retina TAGGCCAAGT (5) 1.7 0.0017 P10.5 crx- retina TGAAAAAAAA (81) 9.3 0.0093 P10.5 crx- retina GGCAGTGGTT (2) 5.6 0.0056 P10.5 crx- retina GGTCGCTCTC 3.7 0.0037 P10.5 crx- retina GCTGACAGTG (5) 1.9 0.0019 P10.5 crx+ retina TGAAAAAAAA (81) 19.2 0.0192 Adult retinal TGAAAAAAAA (81) 13 0.013 Adult retinal GCTGACAGTG (5) 5.6 0.0056 Adult retinal GGCAGTGGTT (2) 3.7 0.0037 Adult retinal GGTCGCTCTC 3.7 0.0037 ONL TGAAAAAAAA (81) 19.2 0.0192 ONL GCTGACAGTG (5) 1.9 0.0019