Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.30042	Pank4	pantothenate kinase 4	4		269614
Gene Ontology	biological_process unknown | cellular_component unknown | molecular_function unknown
Human Homolog	PANK4[pantothenate kinase 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 93 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAAAAAAAA (196) 47.3 0.0473 P8 Cb GC TGAAAAAAAA (81) 27.7 0.0277 P8 Cb GC GAAATATATG (3) 21.2 0.0212 P8 Cb GC CATTGCTGCG 3.3 0.0033 P8 Cb GC GGCTCAAAAA 1.6 0.0016 P8 Cb GC TGCTCAAAAA 1.6 0.0016 Cb medulloblastoma TAAAAAAAAA (196) 106.4 0.1064 Cb medulloblastoma TGAAAAAAAA (81) 78.6 0.0786 Cb medulloblastoma GAAATATATG (3) 50.9 0.0509 Cb medulloblastoma TGCTCAAAAA 4.6 0.0046 P8 GC+1d culture TAAAAAAAAA (196) 66.2 0.0662 P8 GC+1d culture GAAATATATG (3) 37.7 0.0377 P8 GC+1d culture TGAAAAAAAA (81) 26.3 0.0263 P8 GC+1d culture TACCAGAAAG (5) 2.3 0.0023 P8 GC+SHH+1d culture TAAAAAAAAA (196) 93.7 0.0937 P8 GC+SHH+1d culture TGAAAAAAAA (81) 57.4 0.0574 P8 GC+SHH+1d culture GAAATATATG (3) 48 0.048 P8 GC+SHH+1d culture CATTGCTGCG 3.5 0.0035 P8 GC+SHH+1d culture TGCTCAAAAA 2.3 0.0023 3T3 fibroblasts TAAAAAAAAA (196) 7 0.007 3T3 fibroblasts TGAAAAAAAA (81) 7 0.007 E15 cortex TGAAAAAAAA (81) 29.7 0.0297 E15 cortex TAAAAAAAAA (196) 9.9 0.0099 E15 cortex TGCTCAAAAA 4.9 0.0049 P1 cortex TAAAAAAAAA (196) 50 0.05 P1 cortex GAAATATATG (3) 27.3 0.0273 P1 cortex TGAAAAAAAA (81) 4.5 0.0045 Hypothalamus GAAATATATG (3) 99.6 0.0996 Hypothalamus TGAAAAAAAA (81) 36.2 0.0362 Hypothalamus TAAAAAAAAA (196) 32.6 0.0326 Hypothalamus GCTGATGAGG (4) 3.6 0.0036 Hypothalamus CATTGCTGCG 1.8 0.0018 E12.5 retina GAAATATATG (3) 48.8 0.0488 E12.5 retina TGAAAAAAAA (81) 31.9 0.0319 E12.5 retina TAAAAAAAAA (196) 24.4 0.0244 E12.5 retina TACCAGAAAG (5) 9.4 0.0094 E14.5 retina GAAATATATG (3) 80.2 0.0802 E14.5 retina TGAAAAAAAA (81) 49.2 0.0492 E14.5 retina TAAAAAAAAA (196) 41.9 0.0419 E14.5 retina TGCTCAAAAA 1.8 0.0018 E16.5 retina GAAATATATG (3) 88.7 0.0887 E16.5 retina TAAAAAAAAA (196) 23.5 0.0235 E16.5 retina TGAAAAAAAA (81) 16.3 0.0163 E16.5 retina TGCTCAAAAA 5.4 0.0054 E16.5 retina CATTGCTGCG 1.8 0.0018 E18.5 retina TAAAAAAAAA (196) 107.3 0.1073 E18.5 retina GAAATATATG (3) 80 0.08 E18.5 retina TGAAAAAAAA (81) 74.6 0.0746 E18.5 retina TGCTCAAAAA 3.6 0.0036 P0.5 retina TAAAAAAAAA (196) 37.3 0.0373 P0.5 retina TGAAAAAAAA (81) 15.7 0.0157 P0.5 retina GAAATATATG (3) 13.7 0.0137 P2.5 retina TAAAAAAAAA (196) 72.2 0.0722 P2.5 retina GAAATATATG (3) 47.5 0.0475 P2.5 retina TGAAAAAAAA (81) 42.2 0.0422 P2.5 retina TGCTCAAAAA 7 0.007 P2.5 retina TACCAGAAAG (5) 1.8 0.0018 P4.5 retina TAAAAAAAAA (196) 122.8 0.1228 P4.5 retina GAAATATATG (3) 55.5 0.0555 P4.5 retina TGAAAAAAAA (81) 43.6 0.0436 P4.5 retina TGCTCAAAAA 4 0.004 P4.5 retina CATTGCTGCG 2 0.002 P4.5 retina GCTGATGAGG (4) 2 0.002 P4.5 retina TACCAGAAAG (5) 2 0.002 P6.5 retina GAAATATATG (3) 73.4 0.0734 P6.5 retina TAAAAAAAAA (196) 63.4 0.0634 P6.5 retina TGAAAAAAAA (81) 33.3 0.0333 P6.5 retina TGCTCAAAAA 3.3 0.0033 P10.5 crx- retina GAAATATATG (3) 42.7 0.0427 P10.5 crx- retina TAAAAAAAAA (196) 9.3 0.0093 P10.5 crx- retina TGAAAAAAAA (81) 9.3 0.0093 P10.5 crx- retina TGCTCAAAAA 7.4 0.0074 P10.5 crx- retina CATTGCTGCG 3.7 0.0037 P10.5 crx- retina GGCTCAAAAA 1.9 0.0019 P10.5 crx+ retina GAAATATATG (3) 42.3 0.0423 P10.5 crx+ retina TAAAAAAAAA (196) 25 0.025 P10.5 crx+ retina TGAAAAAAAA (81) 19.2 0.0192 P10.5 crx+ retina CATTGCTGCG 5.8 0.0058 P10.5 crx+ retina TGCTCAAAAA 3.8 0.0038 P10.5 crx+ retina GGCTCAAAAA 1.9 0.0019 P10.5 crx+ retina TACCAGAAAG (5) 1.9 0.0019 Adult retinal TAAAAAAAAA (196) 18.5 0.0185 Adult retinal TGAAAAAAAA (81) 13 0.013 Adult retinal GAAATATATG (3) 9.3 0.0093 Adult retinal TACCAGAAAG (5) 7.4 0.0074 Adult retinal TGCTCAAAAA 5.6 0.0056 Adult retinal CATTGCTGCG 3.7 0.0037 ONL TAAAAAAAAA (196) 28.7 0.0287 ONL GAAATATATG (3) 26.8 0.0268 ONL TGAAAAAAAA (81) 19.2 0.0192 ONL TACCAGAAAG (5) 7.7 0.0077 ONL CATTGCTGCG 3.8 0.0038 ONL TGCTCAAAAA 1.9 0.0019