| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAATTGGACA (3) GTGGCTTGCA (3)
| 3.2 | 0.0032 |
| P8 GC+1d culture | AAATTGGACA (3) GCGGCTGGGG
| 5.7 | 0.0057 |
| P8 GC+SHH+1d culture | AAATTGGACA (3) GTGGCTTGCA (3)
| 9.4 | 0.0094 |
| 3T3 fibroblasts | AAATTGGACA (3) GTGGCTTGCA (3)
| 7 | 0.007 |
| P1 cortex | AAATTGGACA (3) GTGGCTTGCA (3)
| 40.9 | 0.0409 |
| Hypothalamus | AAATTGGACA (3) GCGGCTGGGG
| 3.6 | 0.0036 |
| E12.5 retina | AAATTGGACA (3)
| 3.8 | 0.0038 |
| E14.5 retina | AAATTGGACA (3) GCGGCTGGGG GTGGCTTGCA (3)
| 9.1 | 0.0091 |
| E16.5 retina | AAATTGGACA (3) GCGGCTGGGG GTGGCTTGCA (3)
| 7.2 | 0.0072 |
| E18.5 retina | AAATTGGACA (3) GCGGCTGGGG
| 3.6 | 0.0036 |
| P0.5 retina | AAATTGGACA (3) GTGGCTTGCA (3)
| 13.8 | 0.0138 |
| P2.5 retina | GTGGCTTGCA (3)
| 1.8 | 0.0018 |
| P4.5 retina | AAATTGGACA (3) GTGGCTTGCA (3)
| 6 | 0.006 |
| P6.5 retina | AAATTGGACA (3) GTGGCTTGCA (3)
| 8.3 | 0.0083 |
| P10.5 crx- retina | AAATTGGACA (3)
| 5.6 | 0.0056 |
| P10.5 crx+ retina | AAATTGGACA (3)
| 3.8 | 0.0038 |
| Adult retinal | AAATTGGACA (3)
| 5.6 | 0.0056 |
| ONL | AAATTGGACA (3) GTGGCTTGCA (3)
| 15.3 | 0.0153 |