Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.300594	Surf4	surfeit gene 4	2	2 15.5 cM	20932
Gene Ontology	endoplasmic reticulum | integral to membrane
Human Homolog	SURF4[surfeit 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 114 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGCTTGATG (3) 11.4 0.0114 P8 Cb GC CAGCAGAAGC (9) 4.9 0.0049 P8 Cb GC CCGTGCAGCA (2) 1.6 0.0016 P8 Cb GC GCTGAGCCAG (6) 1.6 0.0016 P8 Cb GC GCTTTCTGTG (4) 1.6 0.0016 P8 Cb GC TTCCAAGAAA (4) 1.6 0.0016 Cb medulloblastoma CAGCTTGATG (3) 18.5 0.0185 Cb medulloblastoma AGGGTAGTTG 2.3 0.0023 Cb medulloblastoma CCGTGCAGCA (2) 2.3 0.0023 Cb medulloblastoma TTCCAAGAAA (4) 2.3 0.0023 P8 GC+1d culture GGACAGAACG (4) 5.7 0.0057 P8 GC+1d culture AAGAGGGCAA (5) 2.3 0.0023 P8 GC+1d culture CCGTGCAGCA (2) 2.3 0.0023 P8 GC+1d culture GGGCCCAGAA (4) 2.3 0.0023 P8 GC+1d culture AGGGTAGTTG 1.1 0.0011 P8 GC+1d culture GCTGAGCCAG (6) 1.1 0.0011 P8 GC+1d culture GCTTTCTGTG (4) 1.1 0.0011 P8 GC+1d culture TTCCAAGAAA (4) 1.1 0.0011 P8 GC+SHH+1d culture CAGCAGAAGC (9) 4.7 0.0047 P8 GC+SHH+1d culture GGACAGAACG (4) 4.7 0.0047 P8 GC+SHH+1d culture CAGCTTGATG (3) 2.3 0.0023 P8 GC+SHH+1d culture CCGTGCAGCA (2) 1.2 0.0012 P8 GC+SHH+1d culture GATGACACCG (2) 1.2 0.0012 P8 GC+SHH+1d culture GCTTTCTCTG (3) 1.2 0.0012 P8 GC+SHH+1d culture GCTTTCTGTG (4) 1.2 0.0012 P8 GC+SHH+1d culture TTCCAAGAAA (4) 1.2 0.0012 3T3 fibroblasts CCGTGCAGCA (2) 24.5 0.0245 3T3 fibroblasts CACTTGCCTC (4) 14 0.014 3T3 fibroblasts CAGCTTGATG (3) 3.5 0.0035 3T3 fibroblasts GGACAGAACG (4) 3.5 0.0035 E15 cortex CCGTGCAGCA (2) 9.9 0.0099 E15 cortex CAGCAGAAGC (9) 4.9 0.0049 E15 cortex GATGACACCG (2) 4.9 0.0049 E15 cortex GCTGAGCCAG (6) 4.9 0.0049 P1 cortex CACTTGCCTC (4) 4.5 0.0045 P1 cortex GCTTTCTCTG (3) 4.5 0.0045 P1 cortex GGACAGAACG (4) 4.5 0.0045 P1 cortex GGGCCCAGAA (4) 4.5 0.0045 P1 cortex TTTGGACTTT (4) 4.5 0.0045 Hypothalamus CAGCTTGATG (3) 14.5 0.0145 Hypothalamus CAGCAGAAGC (9) 7.2 0.0072 Hypothalamus GCTTTCTCTG (3) 1.8 0.0018 Hypothalamus GGACAGAACG (4) 1.8 0.0018 Hypothalamus TTCCAAGAAA (4) 1.8 0.0018 E12.5 retina GGGCCCAGAA (4) 1.9 0.0019 E14.5 retina AGGGTAGTTG 1.8 0.0018 E14.5 retina CAGCAGAAGC (9) 1.8 0.0018 E14.5 retina CAGCTTGATG (3) 1.8 0.0018 E14.5 retina GCTTTCTCTG (3) 1.8 0.0018 E14.5 retina GCTTTCTGTG (4) 1.8 0.0018 E14.5 retina GGGCCCAGAA (4) 1.8 0.0018 E16.5 retina CAGCTTGATG (3) 9.1 0.0091 E16.5 retina CAGCAGAAGC (9) 3.6 0.0036 E16.5 retina CCGTGCAGCA (2) 1.8 0.0018 E16.5 retina GCTTTCTGTG (4) 1.8 0.0018 E16.5 retina GGACAGAACG (4) 1.8 0.0018 E16.5 retina TTCCAAGAAA (4) 1.8 0.0018 E18.5 retina CAGCTTGATG (3) 5.5 0.0055 E18.5 retina CAGCAGAAGC (9) 3.6 0.0036 E18.5 retina CCGTGCAGCA (2) 1.8 0.0018 E18.5 retina GCTTTCTCTG (3) 1.8 0.0018 E18.5 retina GCTTTCTGTG (4) 1.8 0.0018 E18.5 retina TTCCAAGAAA (4) 1.8 0.0018 P0.5 retina GCTTTCTCTG (3) 5.9 0.0059 P0.5 retina CAGCAGAAGC (9) 3.9 0.0039 P0.5 retina CAGCTTGATG (3) 3.9 0.0039 P0.5 retina CCGTGCAGCA (2) 3.9 0.0039 P0.5 retina CCTGCTTTGG (4) 2 0.002 P0.5 retina GGACAGAACG (4) 2 0.002 P0.5 retina GGGCCCAGAA (4) 2 0.002 P0.5 retina TCAGTGATTG (2) 2 0.002 P0.5 retina TTCCAAGAAA (4) 2 0.002 P2.5 retina CAGCTTGATG (3) 12.3 0.0123 P2.5 retina GCTTTCTGTG (4) 8.8 0.0088 P2.5 retina TTCCAAGAAA (4) 5.3 0.0053 P2.5 retina GGACAGAACG (4) 3.5 0.0035 P2.5 retina CAGCAGAAGC (9) 1.8 0.0018 P2.5 retina TTTGGACTTT (4) 1.8 0.0018 P4.5 retina CAGCTTGATG (3) 9.9 0.0099 P4.5 retina CCGTGCAGCA (2) 4 0.004 P4.5 retina GCTTTCTCTG (3) 4 0.004 P4.5 retina GCTTTCTGTG (4) 4 0.004 P4.5 retina GGGCCCAGAA (4) 2 0.002 P4.5 retina TCAGTGATTG (2) 2 0.002 P4.5 retina TTCCAAGAAA (4) 2 0.002 P6.5 retina CAGCTTGATG (3) 5 0.005 P6.5 retina TTTGGACTTT (4) 3.3 0.0033 P6.5 retina CCGTGCAGCA (2) 1.7 0.0017 P6.5 retina CCTGCTTTGG (4) 1.7 0.0017 P6.5 retina GATGACACCG (2) 1.7 0.0017 P6.5 retina GGACAGAACG (4) 1.7 0.0017 P6.5 retina TTCCAAGAAA (4) 1.7 0.0017 P10.5 crx- retina CAGCTTGATG (3) 9.3 0.0093 P10.5 crx- retina CCGTGCAGCA (2) 3.7 0.0037 P10.5 crx- retina AAGAGGGCAA (5) 1.9 0.0019 P10.5 crx- retina TCAGTGATTG (2) 1.9 0.0019 P10.5 crx+ retina CAGCTTGATG (3) 7.7 0.0077 P10.5 crx+ retina GCTTTCTGTG (4) 3.8 0.0038 P10.5 crx+ retina GGACAGAACG (4) 3.8 0.0038 P10.5 crx+ retina CCGTGCAGCA (2) 1.9 0.0019 P10.5 crx+ retina GCTTTCTCTG (3) 1.9 0.0019 P10.5 crx+ retina GGGCTGCCAC (6) 1.9 0.0019 P10.5 crx+ retina TTCCAAGAAA (4) 1.9 0.0019 Adult retinal CCGTGCAGCA (2) 3.7 0.0037 Adult retinal CCTGCTTTGG (4) 3.7 0.0037 Adult retinal GGACAGAACG (4) 3.7 0.0037 Adult retinal TCAGTGATTG (2) 3.7 0.0037 Adult retinal CAGCTTGATG (3) 1.9 0.0019 Adult retinal GCTTTCTCTG (3) 1.9 0.0019 ONL GATGAAAAGA (2) 5.7 0.0057 ONL GGACAGAACG (4) 5.7 0.0057 ONL CAGCTTGATG (3) 3.8 0.0038 ONL GGGCTGCCAC (6) 3.8 0.0038 ONL CCGTGCAGCA (2) 1.9 0.0019