Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.30066	Rpl8	ribosomal protein L8	15		26961
Gene Ontology	cytosolic large ribosomal subunit (sensu Eukarya) | intracellular | nucleic acid binding | protein biosynthesis | ribosome | RNA binding | rRNA binding | structural constituent of ribosome
Human Homolog	RPL8[ribosomal protein L8]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 174 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATCCTGTGG (2) 76.7 0.0767 P8 Cb GC ACCCTGGCCG 13.1 0.0131 P8 Cb GC CCCTGAGGGG (2) 8.2 0.0082 P8 Cb GC CCTGAGGGTA (2) 6.5 0.0065 P8 Cb GC TCTTGGGCTG (2) 4.9 0.0049 P8 Cb GC CCTGATGGTA (3) 3.3 0.0033 P8 Cb GC AATCCTGTGA (3) 1.6 0.0016 P8 Cb GC CCCTGAGGGT (4) 1.6 0.0016 P8 Cb GC GACACATCCC (3) 1.6 0.0016 P8 Cb GC GGAAACCCTC (3) 1.6 0.0016 P8 Cb GC GTGCCCACGG (4) 1.6 0.0016 Cb medulloblastoma AATCCTGTGG (2) 20.8 0.0208 Cb medulloblastoma CCCTGAGGGG (2) 20.8 0.0208 Cb medulloblastoma ACAAATTATT (2) 16.2 0.0162 Cb medulloblastoma TCTTGGGCTG (2) 9.2 0.0092 Cb medulloblastoma GCCACACCCC (4) 6.9 0.0069 Cb medulloblastoma GGAAACCCTC (3) 4.6 0.0046 Cb medulloblastoma ACCCTGGCCG 2.3 0.0023 Cb medulloblastoma CCTGATGGTA (3) 2.3 0.0023 Cb medulloblastoma GTGCTGGTGG (12) 2.3 0.0023 P8 GC+1d culture AATCCTGTGG (2) 40 0.04 P8 GC+1d culture CCCTGAGGGG (2) 14.8 0.0148 P8 GC+1d culture TCTTGGGCTG (2) 11.4 0.0114 P8 GC+1d culture CCCTGAGGGT (4) 4.6 0.0046 P8 GC+1d culture AATCCCGTGG 1.1 0.0011 P8 GC+1d culture AATCCTGTGA (3) 1.1 0.0011 P8 GC+1d culture ACAAATTATT (2) 1.1 0.0011 P8 GC+1d culture GACACATCCC (3) 1.1 0.0011 P8 GC+1d culture GCCACACCCC (4) 1.1 0.0011 P8 GC+1d culture GCCACTCCCC (8) 1.1 0.0011 P8 GC+1d culture GGAAACCCTC (3) 1.1 0.0011 P8 GC+1d culture GTGCTGGTGG (12) 1.1 0.0011 P8 GC+SHH+1d culture AATCCTGTGG (2) 50.3 0.0503 P8 GC+SHH+1d culture CCCTGAGGGG (2) 7 0.007 P8 GC+SHH+1d culture TCTTGGGCTG (2) 7 0.007 P8 GC+SHH+1d culture CCCTGAGGGT (4) 3.5 0.0035 P8 GC+SHH+1d culture CCTGATGGTA (3) 2.3 0.0023 P8 GC+SHH+1d culture AATCCCGTGG 1.2 0.0012 3T3 fibroblasts AATCCTGTGG (2) 98.1 0.0981 3T3 fibroblasts CCCTGAGGGT (4) 14 0.014 3T3 fibroblasts CCTGATGGTA (3) 7 0.007 3T3 fibroblasts CCTGAGGGTA (2) 3.5 0.0035 E15 cortex AATCCTGTGG (2) 34.6 0.0346 E15 cortex CCTGAGGGTA (2) 9.9 0.0099 E15 cortex ACCCTGGCCG 4.9 0.0049 E15 cortex CCCTGAGGGG (2) 4.9 0.0049 E15 cortex GTGCCCACGG (4) 4.9 0.0049 E15 cortex TCTTGGGCTG (2) 4.9 0.0049 P1 cortex AATCCTGTGG (2) 18.2 0.0182 P1 cortex CCCTGAGGGT (4) 9.1 0.0091 P1 cortex TCTTGGGCTG (2) 9.1 0.0091 P1 cortex GGAAACCCTC (3) 4.5 0.0045 Hypothalamus CCTGATGGTA (3) 10.9 0.0109 Hypothalamus AATCCTGTGG (2) 9.1 0.0091 Hypothalamus ACAAATTATT (2) 9.1 0.0091 Hypothalamus CCCTGAGGGG (2) 9.1 0.0091 Hypothalamus TCTTGGGCTG (2) 9.1 0.0091 Hypothalamus GCCACACCCC (4) 7.2 0.0072 Hypothalamus CCCTGAGGGT (4) 3.6 0.0036 Hypothalamus CCTGAGGGTA (2) 3.6 0.0036 Hypothalamus GGAAACCCTC (3) 3.6 0.0036 Hypothalamus GGGTCAAGAC (2) 3.6 0.0036 Hypothalamus GCCACTCCCC (8) 1.8 0.0018 Hypothalamus GTGCCCACGG (4) 1.8 0.0018 Hypothalamus GTGCTGGTGG (12) 1.8 0.0018 E12.5 retina AATCCTGTGG (2) 133.3 0.1333 E12.5 retina TCTTGGGCTG (2) 9.4 0.0094 E12.5 retina CCTGATGGTA (3) 5.6 0.0056 E12.5 retina AATCCTGTGA (3) 1.9 0.0019 E12.5 retina CCCTGAGGGG (2) 1.9 0.0019 E12.5 retina CCCTGAGGGT (4) 1.9 0.0019 E12.5 retina GCCACACCCC (4) 1.9 0.0019 E12.5 retina GGGTCAAGAC (2) 1.9 0.0019 E12.5 retina GTGCCCACGG (4) 1.9 0.0019 E14.5 retina AATCCTGTGG (2) 27.3 0.0273 E14.5 retina CCTGATGGTA (3) 12.8 0.0128 E14.5 retina GCCACACCCC (4) 7.3 0.0073 E14.5 retina CCTGAGGGTA (2) 3.6 0.0036 E14.5 retina GTGCCCACGG (4) 3.6 0.0036 E14.5 retina GATCCTCTGG (2) 1.8 0.0018 E14.5 retina GGAAACCCTC (3) 1.8 0.0018 E14.5 retina TCTTGGGCTG (2) 1.8 0.0018 E16.5 retina AATCCTGTGG (2) 36.2 0.0362 E16.5 retina GCCACACCCC (4) 10.9 0.0109 E16.5 retina GGAAACCCTC (3) 7.2 0.0072 E16.5 retina ACCCTGGCCG 5.4 0.0054 E16.5 retina CCTGATGGTA (3) 5.4 0.0054 E16.5 retina CCTGAGGGTA (2) 3.6 0.0036 E16.5 retina GACTCCTGTG (5) 3.6 0.0036 E16.5 retina GATCCTCTGG (2) 3.6 0.0036 E16.5 retina TCTTGGGCTG (2) 3.6 0.0036 E16.5 retina ACAAATTATT (2) 1.8 0.0018 E16.5 retina CCCTGAGGGG (2) 1.8 0.0018 E16.5 retina CCCTGAGGGT (4) 1.8 0.0018 E16.5 retina GTGCCCACGG (4) 1.8 0.0018 E18.5 retina AATCCTGTGG (2) 18.2 0.0182 E18.5 retina GCCACACCCC (4) 9.1 0.0091 E18.5 retina TCTTGGGCTG (2) 5.5 0.0055 E18.5 retina GGAAACCCTC (3) 3.6 0.0036 E18.5 retina AATCCCGTGG 1.8 0.0018 E18.5 retina ACAAATTATT (2) 1.8 0.0018 E18.5 retina CCTGATGGTA (3) 1.8 0.0018 E18.5 retina CTGCCGCCGG 1.8 0.0018 E18.5 retina GATCCTCTGG (2) 1.8 0.0018 P0.5 retina AATCCTGTGG (2) 49.1 0.0491 P0.5 retina GCCACACCCC (4) 5.9 0.0059 P0.5 retina TCTTGGGCTG (2) 5.9 0.0059 P0.5 retina CCTGATGGTA (3) 3.9 0.0039 P0.5 retina CTGCCGCCGG 3.9 0.0039 P0.5 retina AATCCTGTGA (3) 2 0.002 P0.5 retina CCCTGAGGGT (4) 2 0.002 P0.5 retina CCTTTTGAAT (2) 2 0.002 P0.5 retina GGAAACCCTC (3) 2 0.002 P2.5 retina AATCCTGTGG (2) 35.2 0.0352 P2.5 retina CCTGATGGTA (3) 7 0.007 P2.5 retina TCTTGGGCTG (2) 5.3 0.0053 P2.5 retina ACAAATTATT (2) 3.5 0.0035 P2.5 retina CCCTGAGGGT (4) 3.5 0.0035 P2.5 retina GCCACACCCC (4) 3.5 0.0035 P2.5 retina CCCTGAGGGG (2) 1.8 0.0018 P2.5 retina GCCACTCCCC (8) 1.8 0.0018 P2.5 retina GGAAACCCTC (3) 1.8 0.0018 P4.5 retina AATCCTGTGG (2) 19.8 0.0198 P4.5 retina TCTTGGGCTG (2) 5.9 0.0059 P4.5 retina ACAAATTATT (2) 4 0.004 P4.5 retina CCCTGAGGGT (4) 4 0.004 P4.5 retina GCCACACCCC (4) 4 0.004 P4.5 retina CCTGATGGTA (3) 2 0.002 P4.5 retina GACTCCTGTG (5) 2 0.002 P4.5 retina GCCACTCCCC (8) 2 0.002 P6.5 retina AATCCTGTGG (2) 36.7 0.0367 P6.5 retina CCTGATGGTA (3) 6.7 0.0067 P6.5 retina ACAAATTATT (2) 3.3 0.0033 P6.5 retina CCCTGAGGGT (4) 3.3 0.0033 P6.5 retina TCTTGGGCTG (2) 3.3 0.0033 P6.5 retina CCCTGAGGGG (2) 1.7 0.0017 P6.5 retina GCCACACCCC (4) 1.7 0.0017 P6.5 retina GGAAACCCTC (3) 1.7 0.0017 P10.5 crx- retina AATCCTGTGG (2) 65 0.065 P10.5 crx- retina CCCTGAGGGG (2) 7.4 0.0074 P10.5 crx- retina CCCTGAGGGT (4) 7.4 0.0074 P10.5 crx- retina GGAAACCCTC (3) 7.4 0.0074 P10.5 crx- retina TCTTGGGCTG (2) 5.6 0.0056 P10.5 crx- retina CCTGAGGGTA (2) 1.9 0.0019 P10.5 crx- retina GTGCTGGTGG (12) 1.9 0.0019 P10.5 crx+ retina AATCCTGTGG (2) 36.5 0.0365 P10.5 crx+ retina TCTTGGGCTG (2) 5.8 0.0058 P10.5 crx+ retina CCCTGAGGGG (2) 3.8 0.0038 P10.5 crx+ retina CCCTGAGGGT (4) 3.8 0.0038 P10.5 crx+ retina CTGCCGCCGG 3.8 0.0038 P10.5 crx+ retina GTGCTGGTGG (12) 3.8 0.0038 P10.5 crx+ retina AATCCTGTGA (3) 1.9 0.0019 P10.5 crx+ retina ACAAATTATT (2) 1.9 0.0019 P10.5 crx+ retina CCTTTTGAAT (2) 1.9 0.0019 P10.5 crx+ retina GACACATCCC (3) 1.9 0.0019 P10.5 crx+ retina GATCCTCTGG (2) 1.9 0.0019 P10.5 crx+ retina GCCACACCCC (4) 1.9 0.0019 P10.5 crx+ retina GGAAACCCTC (3) 1.9 0.0019 P10.5 crx+ retina GGGTCAAGAC (2) 1.9 0.0019 Adult retinal AATCCTGTGG (2) 35.2 0.0352 Adult retinal GTGCTGGTGG (12) 13 0.013 Adult retinal CCCTGAGGGT (4) 9.3 0.0093 Adult retinal AATCCCGTGG 1.9 0.0019 Adult retinal AATCCTGTGA (3) 1.9 0.0019 Adult retinal ACAAATTATT (2) 1.9 0.0019 Adult retinal ACCCTGGCCG 1.9 0.0019 Adult retinal CCCTGAGGGG (2) 1.9 0.0019 Adult retinal CCTGAGGGTA (2) 1.9 0.0019 Adult retinal TCTTGGGCTG (2) 1.9 0.0019 ONL AATCCTGTGG (2) 49.8 0.0498 ONL GTGCTGGTGG (12) 5.7 0.0057 ONL CCCTGAGGGG (2) 3.8 0.0038 ONL CCCTGAGGGT (4) 1.9 0.0019 ONL CCTTTTGAAT (2) 1.9 0.0019