Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.30071 Laptm4alysosomal-associated protein transmembrane 4A 12    17775 
 Gene Ontology integral to membrane | transport
 Human Homolog LAPTM4A[lysosomal-associated protein transmembrane 4 alpha]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 144 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCAAAAAAAAAA (658)203.90.2039
P8 Cb GCCTTCTCATTT (2)37.50.0375
P8 Cb GCCAACCATCAT11.40.0114
P8 Cb GCTTTTCTTTTT (10)8.20.0082
P8 Cb GCTCCTTAAAAA (5)1.60.0016
Cb medulloblastomaAAAAAAAAAA (658)797.80.7978
Cb medulloblastomaCTTCTCATTT (2)30.10.0301
Cb medulloblastomaCAACCATCAT6.90.0069
Cb medulloblastomaCTGTTAGTCG (4)2.30.0023
Cb medulloblastomaGCTTCTCATT (5)2.30.0023
P8 GC+1d cultureAAAAAAAAAA (658)204.30.2043
P8 GC+1d cultureCTTCTCATTT (2)38.80.0388
P8 GC+1d cultureCAACCATCAT14.80.0148
P8 GC+1d cultureTATTAATAAG (2)80.008
P8 GC+1d cultureTTTTCTTTTT (10)80.008
P8 GC+1d cultureGAGACCCCTC (4)5.70.0057
P8 GC+1d cultureCCAGCTGTCA (2)2.30.0023
P8 GC+1d cultureCCAGCTGTCT (2)2.30.0023
P8 GC+1d cultureTCCTTAAAAA (5)2.30.0023
P8 GC+1d cultureGCTTCTCATT (5)1.10.0011
P8 GC+SHH+1d cultureAAAAAAAAAA (658)278.70.2787
P8 GC+SHH+1d cultureCTTCTCATTT (2)29.30.0293
P8 GC+SHH+1d cultureCAACCATCAT8.20.0082
P8 GC+SHH+1d cultureTTTTCTTTTT (10)4.70.0047
P8 GC+SHH+1d cultureGAGACCCCTC (4)2.30.0023
P8 GC+SHH+1d cultureAACACCATCC (2)1.20.0012
P8 GC+SHH+1d cultureCCAGCTGTCA (2)1.20.0012
P8 GC+SHH+1d cultureCCAGCTGTCT (2)1.20.0012
3T3 fibroblastsAAAAAAAAAA (658)280.028
3T3 fibroblastsCTTCTCATTT (2)280.028
3T3 fibroblastsCCAGCTGTCA (2)10.50.0105
3T3 fibroblastsGCTTCTCATT (5)70.007
3T3 fibroblastsTTTTCTTTTT (10)70.007
3T3 fibroblastsCAACCATCAT3.50.0035
3T3 fibroblastsGAGACCCCTC (4)3.50.0035
E15 cortexAAAAAAAAAA (658)212.80.2128
E15 cortexCTTCTCATTT (2)14.80.0148
P1 cortexAAAAAAAAAA (658)245.40.2454
P1 cortexCTTCTCATTT (2)18.20.0182
P1 cortexCAACCATCAT9.10.0091
P1 cortexGAGACCCCTC (4)4.50.0045
P1 cortexTCCTTAAAAA (5)4.50.0045
HypothalamusAAAAAAAAAA (658)123.20.1232
HypothalamusCTTCTCATTT (2)18.10.0181
HypothalamusCAACCATCAT5.40.0054
HypothalamusTTTTCTTTTT (10)5.40.0054
HypothalamusGAGACCCCTC (4)3.60.0036
HypothalamusCCAGCTGTCT (2)1.80.0018
HypothalamusGCTTCTCATT (5)1.80.0018
HypothalamusTATTAATAAG (2)1.80.0018
HypothalamusTTTTTCATTT1.80.0018
E12.5 retinaAAAAAAAAAA (658)138.90.1389
E12.5 retinaCTTCTCATTT (2)22.50.0225
E12.5 retinaCAACCATCAT5.60.0056
E12.5 retinaCCAGCTGTCT (2)3.80.0038
E12.5 retinaTATTAATAAG (2)3.80.0038
E12.5 retinaAACACCATCC (2)1.90.0019
E12.5 retinaCCAGCTGTCA (2)1.90.0019
E12.5 retinaTCCTTAAAAA (5)1.90.0019
E12.5 retinaTTTTCTTTTT (10)1.90.0019
E14.5 retinaAAAAAAAAAA (658)94.70.0947
E14.5 retinaCTTCTCATTT (2)23.70.0237
E14.5 retinaCAGCTTGTCA (6)5.50.0055
E14.5 retinaCTGTTAGTCG (4)5.50.0055
E14.5 retinaCAACCATCAT3.60.0036
E14.5 retinaGCTTCTCATT (5)3.60.0036
E14.5 retinaTATTAATAAG (2)3.60.0036
E14.5 retinaGAGACCCCTC (4)1.80.0018
E14.5 retinaTTTTCTTTTT (10)1.80.0018
E16.5 retinaAAAAAAAAAA (658)43.50.0435
E16.5 retinaCTTCTCATTT (2)18.10.0181
E16.5 retinaCAACCATCAT3.60.0036
E16.5 retinaCAGCTTGTCA (6)3.60.0036
E16.5 retinaTTTTCTTTTT (10)3.60.0036
E16.5 retinaAACACCATCC (2)1.80.0018
E16.5 retinaCTGTTAGTCG (4)1.80.0018
E16.5 retinaCTTTTCATTT (4)1.80.0018
E16.5 retinaGAGACCCCTC (4)1.80.0018
E16.5 retinaGCTTCTCATT (5)1.80.0018
E16.5 retinaGTGGTCACAA (7)1.80.0018
E16.5 retinaTATTAATAAG (2)1.80.0018
E18.5 retinaAAAAAAAAAA (658)374.70.3747
E18.5 retinaCTTCTCATTT (2)27.30.0273
E18.5 retinaCAACCATCAT10.90.0109
E18.5 retinaTTTTCTTTTT (10)7.30.0073
E18.5 retinaGAGACCCCTC (4)3.60.0036
E18.5 retinaCAATGGACAG (2)1.80.0018
E18.5 retinaTATTAATAAG (2)1.80.0018
E18.5 retinaTCCTTAAAAA (5)1.80.0018
P0.5 retinaAAAAAAAAAA (658)117.80.1178
P0.5 retinaCTTCTCATTT (2)15.70.0157
P0.5 retinaCAACCATCAT7.90.0079
P0.5 retinaCTGTTAGTCG (4)3.90.0039
P0.5 retinaTCCTTAAAAA (5)3.90.0039
P0.5 retinaCCAGCTGTCT (2)20.002
P0.5 retinaGAGACCCCTC (4)20.002
P0.5 retinaGTGGTCACAA (7)20.002
P0.5 retinaTATTAATAAG (2)20.002
P2.5 retinaAAAAAAAAAA (658)329.10.3291
P2.5 retinaCTTCTCATTT (2)24.60.0246
P2.5 retinaCAACCATCAT12.30.0123
P2.5 retinaCTGGTTTATG (2)1.80.0018
P2.5 retinaTATTAATAAG (2)1.80.0018
P2.5 retinaTCCTTAAAAA (5)1.80.0018
P2.5 retinaTTTTCTTTTT (10)1.80.0018
P4.5 retinaAAAAAAAAAA (658)283.30.2833
P4.5 retinaCTTCTCATTT (2)29.70.0297
P4.5 retinaCAACCATCAT7.90.0079
P4.5 retinaGAGACCCCTC (4)20.002
P6.5 retinaAAAAAAAAAA (658)266.80.2668
P6.5 retinaCTTCTCATTT (2)33.30.0333
P6.5 retinaCAACCATCAT11.70.0117
P6.5 retinaTATTAATAAG (2)50.005
P6.5 retinaAACACCATCC (2)3.30.0033
P6.5 retinaCAATGGACAG (2)3.30.0033
P6.5 retinaCCAGCTGTCA (2)1.70.0017
P6.5 retinaCTGGTTTATG (2)1.70.0017
P6.5 retinaCTTTTCATTT (4)1.70.0017
P6.5 retinaTCCTTAAAAA (5)1.70.0017
P6.5 retinaTTTTCTTTTT (10)1.70.0017
P6.5 retinaTTTTTCATTT1.70.0017
P10.5 crx- retinaAAAAAAAAAA (658)44.60.0446
P10.5 crx- retinaCTTCTCATTT (2)24.20.0242
P10.5 crx- retinaCAACCATCAT3.70.0037
P10.5 crx- retinaTATTAATAAG (2)3.70.0037
P10.5 crx- retinaCTTTTCATTT (4)1.90.0019
P10.5 crx- retinaGTGGTCACAA (7)1.90.0019
P10.5 crx+ retinaAAAAAAAAAA (658)96.10.0961
P10.5 crx+ retinaCTTCTCATTT (2)17.30.0173
P10.5 crx+ retinaCTGTTAGTCG (4)7.70.0077
P10.5 crx+ retinaCAACCATCAT5.80.0058
P10.5 crx+ retinaTTTTCTTTTT (10)3.80.0038
P10.5 crx+ retinaCCAGCTGTCA (2)1.90.0019
P10.5 crx+ retinaCTTTTCATTT (4)1.90.0019
Adult retinalAAAAAAAAAA (658)57.40.0574
Adult retinalCTTCTCATTT (2)14.80.0148
Adult retinalCAACCATCAT1.90.0019
Adult retinalGAGACCCCTC (4)1.90.0019
Adult retinalGTGGTCACAA (7)1.90.0019
ONLAAAAAAAAAA (658)103.40.1034
ONLCTGTTAGTCG (4)5.70.0057
ONLCTTCTCATTT (2)3.80.0038
ONLTTTTCTTTTT (10)3.80.0038
ONLCTGGTTTATG (2)1.90.0019