Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.30078
D1Mgi28
DNA Segment, Chr 1, Mouse Genome Informatics 28
1
98589
Mm.30078
Ga17
dendritic cell protein GA17
2
2 57.91 cM
98221
Human Homolog
GA17[dendritic cell protein]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 58 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AGCCAAAATA (
7
)
4.9
0.0049
P8 Cb GC
TGAACTGGTG (
3
)
4.9
0.0049
P8 Cb GC
AGCAAAATAT
(
3
)
3.3
0.0033
P8 Cb GC
GATAAGCTCG
(
2
)
1.6
0.0016
P8 Cb GC
GGAATGGACA (
7
)
1.6
0.0016
P8 Cb GC
GGGGAAGGAA (
7
)
1.6
0.0016
Cb medulloblastoma
AGCCAAAATA (
7
)
4.6
0.0046
Cb medulloblastoma
AGCAAAATAT
(
3
)
2.3
0.0023
Cb medulloblastoma
TGAACTGGTG (
3
)
2.3
0.0023
P8 GC+1d culture
AGCCAAAATA (
7
)
4.6
0.0046
P8 GC+1d culture
AGCAAAATAT
(
3
)
3.4
0.0034
P8 GC+1d culture
TGAACTGGTG (
3
)
3.4
0.0034
P8 GC+1d culture
GGAATGGACA (
7
)
1.1
0.0011
P8 GC+1d culture
TAGAAAGTGT
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
AGCCAAAATA (
7
)
3.5
0.0035
P8 GC+SHH+1d culture
TGAACTGGTG (
3
)
3.5
0.0035
P8 GC+SHH+1d culture
AGCAAAATAT
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
GATAAGCTCG
(
2
)
1.2
0.0012
E15 cortex
GGGGAAGGAA (
7
)
4.9
0.0049
E15 cortex
TGAACTGGTG (
3
)
4.9
0.0049
P1 cortex
TGAACTGGTG (
3
)
4.5
0.0045
Hypothalamus
AGCCAAAATA (
7
)
3.6
0.0036
Hypothalamus
GTGGAATTGC
(
5
)
3.6
0.0036
Hypothalamus
TGAACTGGTG (
3
)
3.6
0.0036
Hypothalamus
GGAATGGACA (
7
)
1.8
0.0018
E12.5 retina
TGAACTGGTG (
3
)
5.6
0.0056
E12.5 retina
AGCAAAATAT
(
3
)
3.8
0.0038
E14.5 retina
TGAACTGGTG (
3
)
9.1
0.0091
E14.5 retina
AGCCAAAATA (
7
)
1.8
0.0018
E14.5 retina
TAACAAGCCA
(
4
)
1.8
0.0018
E14.5 retina
TAGAAAGTGT
(
3
)
1.8
0.0018
E16.5 retina
TGAACTGGTG (
3
)
12.7
0.0127
E16.5 retina
TGGGGCCATC
(
3
)
5.4
0.0054
E16.5 retina
GGGGAAGGAA (
7
)
1.8
0.0018
E16.5 retina
GTGGAATTGC
(
5
)
1.8
0.0018
E16.5 retina
TAACAAGCCA
(
4
)
1.8
0.0018
E18.5 retina
TGAACTGGTG (
3
)
5.5
0.0055
E18.5 retina
AGCCAAAATA (
7
)
3.6
0.0036
E18.5 retina
TAACAAGCCA
(
4
)
1.8
0.0018
P0.5 retina
AGCAAAATAT
(
3
)
3.9
0.0039
P2.5 retina
TGAACTGGTG (
3
)
5.3
0.0053
P2.5 retina
AGCAAAATAT
(
3
)
3.5
0.0035
P2.5 retina
TAGAAAGTGT
(
3
)
1.8
0.0018
P4.5 retina
TGAACTGGTG (
3
)
7.9
0.0079
P4.5 retina
TAACAAGCCA
(
4
)
2
0.002
P6.5 retina
TGAACTGGTG (
3
)
8.3
0.0083
P6.5 retina
AGCAAAATAT
(
3
)
1.7
0.0017
P6.5 retina
AGCCAAAATA (
7
)
1.7
0.0017
P6.5 retina
GGGGAAGGAA (
7
)
1.7
0.0017
P10.5 crx- retina
AGCAAAATAT
(
3
)
11.1
0.0111
P10.5 crx- retina
TGAACTGGTG (
3
)
11.1
0.0111
P10.5 crx- retina
GGGGAAGGAA (
7
)
1.9
0.0019
P10.5 crx+ retina
TGAACTGGTG (
3
)
7.7
0.0077
Adult retinal
AGCAAAATAT
(
3
)
1.9
0.0019
Adult retinal
TAACAAGCCA
(
4
)
1.9
0.0019
Adult retinal
TGAACTGGTG (
3
)
1.9
0.0019
ONL
AGCCAAAATA (
7
)
3.8
0.0038
ONL
GGAATGGACA (
7
)
1.9
0.0019
