Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.301039	Ncoa1	nuclear receptor coactivator 1	12	12 A2-A3	17977
Mm.301039	2610001N11Rik	RIKEN cDNA 2610001N11 gene	12		72332
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 65 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGAGTTATA (3) 3.3 0.0033 P8 Cb GC GTCTCTGCCA (6) 1.6 0.0016 Cb medulloblastoma CAGAGTTATA (3) 13.9 0.0139 Cb medulloblastoma TCACCTTCAA (3) 4.6 0.0046 Cb medulloblastoma GTCTCTGGGC (5) 2.3 0.0023 P8 GC+1d culture TCACCTTCAA (3) 5.7 0.0057 P8 GC+1d culture TTTATTATTT (15) 2.3 0.0023 P8 GC+1d culture AGCTGGATTC (4) 1.1 0.0011 P8 GC+1d culture GTCTCTGGGC (5) 1.1 0.0011 P8 GC+SHH+1d culture TCACCTTCAA (3) 2.3 0.0023 P8 GC+SHH+1d culture CAGAGTTATA (3) 1.2 0.0012 P8 GC+SHH+1d culture CAGCAGCAGA (5) 1.2 0.0012 P8 GC+SHH+1d culture GTCTCTGGGC (5) 1.2 0.0012 P8 GC+SHH+1d culture TTTATTATTT (15) 1.2 0.0012 3T3 fibroblasts GTCTCTGCCA (6) 3.5 0.0035 3T3 fibroblasts TCACCTTCAA (3) 3.5 0.0035 P1 cortex TTTATTATTT (15) 9.1 0.0091 P1 cortex TCACCTTCAA (3) 4.5 0.0045 Hypothalamus TTTATTATTT (15) 7.2 0.0072 Hypothalamus GTCTCTGGGC (5) 1.8 0.0018 Hypothalamus TCACCTTCAA (3) 1.8 0.0018 E14.5 retina CAGAGTTATA (3) 3.6 0.0036 E14.5 retina TTTATTATTT (15) 3.6 0.0036 E14.5 retina GTCTCTGGGC (5) 1.8 0.0018 E14.5 retina TCACCTTCAA (3) 1.8 0.0018 E16.5 retina CAGAGTTATA (3) 1.8 0.0018 E16.5 retina GTCTCTGGGC (5) 1.8 0.0018 E16.5 retina TTTATTATTT (15) 1.8 0.0018 E18.5 retina CAGAGTTATA (3) 5.5 0.0055 E18.5 retina TCACCTTCAA (3) 1.8 0.0018 E18.5 retina TTTATTATTT (15) 1.8 0.0018 P0.5 retina TCACCTTCAA (3) 3.9 0.0039 P0.5 retina AGCTGGATTC (4) 2 0.002 P0.5 retina CAGAGTTATA (3) 2 0.002 P0.5 retina GTACCAATTA (3) 2 0.002 P0.5 retina GTCTCTGCCA (6) 2 0.002 P2.5 retina TCACCTTCAA (3) 15.8 0.0158 P2.5 retina TTTATTATTT (15) 12.3 0.0123 P2.5 retina CAGAGTTATA (3) 1.8 0.0018 P2.5 retina GTACCAATTA (3) 1.8 0.0018 P4.5 retina TTTATTATTT (15) 5.9 0.0059 P4.5 retina CAGAGTTATA (3) 2 0.002 P4.5 retina TCACCTTCAA (3) 2 0.002 P6.5 retina TCACCTTCAA (3) 6.7 0.0067 P6.5 retina TTTATTATTT (15) 3.3 0.0033 P6.5 retina CAGAGTTATA (3) 1.7 0.0017 P6.5 retina CAGCAGCAGA (5) 1.7 0.0017 P6.5 retina GTACCAATTA (3) 1.7 0.0017 P10.5 crx- retina TCACCTTCAA (3) 7.4 0.0074 P10.5 crx- retina GTCTCTGGGC (5) 5.6 0.0056 P10.5 crx- retina AGCTGGATTC (4) 1.9 0.0019 P10.5 crx- retina CAGAGTTATA (3) 1.9 0.0019 P10.5 crx+ retina TCACCTTCAA (3) 11.5 0.0115 P10.5 crx+ retina CAGAGTTATA (3) 3.8 0.0038 P10.5 crx+ retina GTCTCTGGGC (5) 3.8 0.0038 P10.5 crx+ retina CAGCAGCAGA (5) 1.9 0.0019 P10.5 crx+ retina TTTATTATTT (15) 1.9 0.0019 Adult retinal TCACCTTCAA (3) 5.6 0.0056 Adult retinal GTCTCTGGGC (5) 1.9 0.0019 Adult retinal TTTATTATTT (15) 1.9 0.0019 ONL CAGAGTTATA (3) 3.8 0.0038 ONL TCACCTTCAA (3) 3.8 0.0038 ONL CAGCAGCAGA (5) 1.9 0.0019 ONL GTCTCTGGGC (5) 1.9 0.0019 ONL TTTATTATTT (15) 1.9 0.0019