| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | TTTTATTATT (2) TTTTATTCTT (2)
| 3.2 | 0.0032 |
| Cb medulloblastoma | GTGTATTTTA
| 2.3 | 0.0023 |
| P8 GC+1d culture | GTGTATTTTA TTTTATTATT (2) TTTTATTCTT (2)
| 13.6 | 0.0136 |
| P8 GC+SHH+1d culture | AAAACCAGAA (2) GTGTATTTTA TTTTATTATT (2) TTTTATTCTT (2)
| 23.3 | 0.0233 |
| P1 cortex | TTTTATTATT (2)
| 4.5 | 0.0045 |
| Hypothalamus | AAAACCAGAA (2) GTGTATTTTA TTTTATTCTT (2)
| 5.4 | 0.0054 |
| E12.5 retina | AAAACCAGAA (2) TTTTATTATT (2) TTTTATTCTT (2)
| 9.5 | 0.0095 |
| E14.5 retina | TTTTATTATT (2) TTTTATTCTT (2)
| 9.1 | 0.0091 |
| E16.5 retina | AAAACCAGAA (2) GTGTATTTTA TTTTATTATT (2) TTTTATTCTT (2)
| 16.2 | 0.0162 |
| E18.5 retina | TTTTATTATT (2) TTTTATTCTT (2)
| 23.7 | 0.0237 |
| P0.5 retina | AAAACCAGAA (2)
| 2 | 0.002 |
| P2.5 retina | GTGTATTTTA TTTTATTATT (2)
| 8.8 | 0.0088 |
| P4.5 retina | TTTTATTATT (2) TTTTATTCTT (2)
| 9.9 | 0.0099 |
| P6.5 retina | AAAACCAGAA (2) TTTTATTATT (2)
| 6.7 | 0.0067 |
| P10.5 crx- retina | TTTTATTATT (2) TTTTATTCTT (2)
| 7.4 | 0.0074 |
| P10.5 crx+ retina | TTTTATTATT (2)
| 1.9 | 0.0019 |
| Adult retinal | TTTTATTCTT (2)
| 1.9 | 0.0019 |
| ONL | GTGTATTTTA
| 1.9 | 0.0019 |