Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.301259 Tuba1tubulin, alpha 1 15  15 F1 (15 60.4 cM)  22142 
 Gene Ontology GTP binding | microtubule | microtubule-based movement | microtubule-based process | structural constituent of cytoskeleton | structural molecule activity
 Human Homolog TUBA3[tubulin, alpha 3]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 189 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCGCTGCCCTAG (2)311.60.3116
P8 Cb GCGCATCCAGCC620.062
P8 Cb GCTGCTGCCATT (2)14.70.0147
P8 Cb GCCCCTCACCCA (2)4.90.0049
P8 Cb GCGCTTGCTGCC4.90.0049
P8 Cb GCGTCACGATGT4.90.0049
P8 Cb GCTTGGCCAGGC4.90.0049
P8 Cb GCGCTGCCCTAA (2)3.30.0033
P8 Cb GCTCCTCACGGG3.30.0033
P8 Cb GCGCTGCCTTAG (2)1.60.0016
P8 Cb GCGTAGACAATG1.60.0016
Cb medulloblastomaGCTGCCCTAG (2)83.20.0832
Cb medulloblastomaGCATCCAGCC4.60.0046
Cb medulloblastomaCCCTCACCCA (2)2.30.0023
Cb medulloblastomaGTAGACAATG2.30.0023
Cb medulloblastomaGTCACGATGT2.30.0023
Cb medulloblastomaTCCTCACGGG2.30.0023
P8 GC+1d cultureGCTGCCCTAG (2)552.50.5525
P8 GC+1d cultureTGCTGCCATT (2)9.10.0091
P8 GC+1d cultureCCCTCACCCA (2)5.70.0057
P8 GC+1d cultureTCCTCACGGG4.60.0046
P8 GC+1d cultureGCTGCCCTAA (2)2.30.0023
P8 GC+1d cultureGCTTGCTGCC2.30.0023
P8 GC+1d cultureGTAGACAATG2.30.0023
P8 GC+1d cultureAGCAGCTTTC1.10.0011
P8 GC+1d cultureGCATCCAGCC1.10.0011
P8 GC+1d cultureGCTGTCCTAG (2)1.10.0011
P8 GC+1d cultureGGACATTTAA1.10.0011
P8 GC+1d cultureGGGATGGGCC1.10.0011
P8 GC+1d cultureGTCACGATGT1.10.0011
P8 GC+1d cultureGTTGCCCTAG1.10.0011
P8 GC+SHH+1d cultureGCTGCCCTAG (2)380.50.3805
P8 GC+SHH+1d cultureTGCTGCCATT (2)23.40.0234
P8 GC+SHH+1d cultureCCCTCACCCA (2)10.50.0105
P8 GC+SHH+1d cultureTCCTCACGGG8.20.0082
P8 GC+SHH+1d cultureCACACAGCTC2.30.0023
P8 GC+SHH+1d cultureGCATCCAGCC1.20.0012
P8 GC+SHH+1d cultureGCTTGCTGCC1.20.0012
P8 GC+SHH+1d cultureGTAGACAATG1.20.0012
P8 GC+SHH+1d cultureGTCACGATGT1.20.0012
P8 GC+SHH+1d cultureTTGGCCAGGC1.20.0012
3T3 fibroblastsGCTGCCCTAG (2)266.40.2664
3T3 fibroblastsTGCTGCCATT (2)45.60.0456
3T3 fibroblastsGTAGACAATG70.007
3T3 fibroblastsTCCTCACGGG70.007
E15 cortexGCTGCCCTAG (2)1944.51.9445
E15 cortexGCTGCCCTAA (2)24.70.0247
E15 cortexGCTGCCTAGA19.80.0198
E15 cortexGGCTGCCCTA19.80.0198
E15 cortexCCCTCACCCA (2)9.90.0099
E15 cortexGCATCCAGCC9.90.0099
E15 cortexGCTGTCCTAG (2)4.90.0049
E15 cortexGCTTGCTGCC4.90.0049
E15 cortexTGCTGCCATT (2)4.90.0049
P1 cortexGCTGCCCTAG (2)1154.51.1545
P1 cortexGCTGCCTAGA27.30.0273
P1 cortexGCTGTCCTAG (2)13.60.0136
P1 cortexGGCTGCCCTA13.60.0136
P1 cortexGCTGCCCTAA (2)9.10.0091
P1 cortexGTTGCCCTAG9.10.0091
P1 cortexCACACAGCTC4.50.0045
P1 cortexCCCTCACCCA (2)4.50.0045
P1 cortexGCATCCAGCC4.50.0045
P1 cortexGCTGCCTTAG (2)4.50.0045
P1 cortexGCTTGCTGCC4.50.0045
P1 cortexGTCACGATGT4.50.0045
P1 cortexTTTATTGTGT4.50.0045
HypothalamusGCTGCCCTAG (2)41.70.0417
HypothalamusAGGAGGTGAG3.60.0036
HypothalamusCCCTCACCCA (2)3.60.0036
HypothalamusGTAGACAATG3.60.0036
HypothalamusTCCTCACGGG3.60.0036
HypothalamusGAAAGGAGGG1.80.0018
E12.5 retinaGCTGCCCTAG (2)200.90.2009
E12.5 retinaTGCTGCCATT (2)5.60.0056
E12.5 retinaGCTGTCCTAG (2)3.80.0038
E12.5 retinaGAAAGGAGGG1.90.0019
E12.5 retinaGCTGCCCTAA (2)1.90.0019
E12.5 retinaGTCACGATGT1.90.0019
E12.5 retinaTCCTCACGGG1.90.0019
E12.5 retinaTGCCCCCGGG1.90.0019
E12.5 retinaTGCCCCGGGA (2)1.90.0019
E14.5 retinaGCTGCCCTAG (2)78.30.0783
E14.5 retinaTCCTCACGGG21.90.0219
E14.5 retinaTGCTGCCATT (2)12.80.0128
E14.5 retinaTTGGCCAGGC7.30.0073
E14.5 retinaAGGAGGTGAG3.60.0036
E14.5 retinaATGAGCAACA3.60.0036
E14.5 retinaCCCTCACCCA (2)3.60.0036
E14.5 retinaGGGATGGGCC3.60.0036
E14.5 retinaTGCCCCGGGA (2)3.60.0036
E14.5 retinaCACACAGCTC1.80.0018
E14.5 retinaGTAGACAATG1.80.0018
E14.5 retinaGTGATGCTTC1.80.0018
E16.5 retinaGCTGCCCTAG (2)99.60.0996
E16.5 retinaTCCTCACGGG19.90.0199
E16.5 retinaTGCTGCCATT (2)12.70.0127
E16.5 retinaCCCTCACCCA (2)10.90.0109
E16.5 retinaTTGGCCAGGC10.90.0109
E16.5 retinaGCATCCAGCC7.20.0072
E16.5 retinaGCTTGCTGCC5.40.0054
E16.5 retinaGTAGACAATG5.40.0054
E16.5 retinaTGCCCCCGGG5.40.0054
E16.5 retinaAGGAGGTGAG3.60.0036
E16.5 retinaCACACAGCTC3.60.0036
E16.5 retinaAGCAGCTTTC1.80.0018
E16.5 retinaGCTGCCCTAA (2)1.80.0018
E16.5 retinaGGCTGCCCTA1.80.0018
E18.5 retinaGCTGCCCTAG (2)138.20.1382
E18.5 retinaTGCTGCCATT (2)23.60.0236
E18.5 retinaTCCTCACGGG5.50.0055
E18.5 retinaCCCTCACCCA (2)3.60.0036
E18.5 retinaGCTGCCCTAA (2)3.60.0036
E18.5 retinaGGGATGGGCC3.60.0036
E18.5 retinaTTTATTGTGT3.60.0036
E18.5 retinaGCATCCAGCC1.80.0018
E18.5 retinaGTAGACAATG1.80.0018
E18.5 retinaTGCCCCCGGG1.80.0018
E18.5 retinaTTGGCCAGGC1.80.0018
P0.5 retinaGCTGCCCTAG (2)351.30.3513
P0.5 retinaTGCTGCCATT (2)19.60.0196
P0.5 retinaGCTGCCCTAA (2)7.90.0079
P0.5 retinaTCCTCACGGG5.90.0059
P0.5 retinaGCTTGCTGCC3.90.0039
P0.5 retinaCCCTCACCCA (2)20.002
P0.5 retinaGATGGAGATG (2)20.002
P0.5 retinaGCTGCCTTAG (2)20.002
P0.5 retinaGGCTGCCCTA20.002
P0.5 retinaGGGATGGGCC20.002
P0.5 retinaGTAGACAATG20.002
P0.5 retinaGTCACGATGT20.002
P2.5 retinaGCTGCCCTAG (2)123.20.1232
P2.5 retinaTGCTGCCATT (2)14.10.0141
P2.5 retinaGTCACGATGT5.30.0053
P2.5 retinaGCATCCAGCC1.80.0018
P2.5 retinaGCTGCCCTAA (2)1.80.0018
P2.5 retinaGCTGCCTTAG (2)1.80.0018
P2.5 retinaGGACATTTAA1.80.0018
P2.5 retinaGGCTGCCCTA1.80.0018
P2.5 retinaGTAGACAATG1.80.0018
P2.5 retinaGTTGCCCTAG1.80.0018
P4.5 retinaGCTGCCCTAG (2)99.10.0991
P4.5 retinaTGCTGCCATT (2)5.90.0059
P4.5 retinaGCTGCCCTAA (2)40.004
P4.5 retinaGGACATTTAA40.004
P4.5 retinaTCCTCACGGG40.004
P4.5 retinaCACACAGCTC20.002
P4.5 retinaGATGGAGATG (2)20.002
P4.5 retinaGTCACGATGT20.002
P6.5 retinaGCTGCCCTAG (2)161.70.1617
P6.5 retinaGAAAGGAGGG3.30.0033
P6.5 retinaGCTGCCCTAA (2)3.30.0033
P6.5 retinaTGCTGCCATT (2)3.30.0033
P6.5 retinaGATGGAGATG (2)1.70.0017
P6.5 retinaGCATCCAGCC1.70.0017
P6.5 retinaGCTGCCTAGA1.70.0017
P6.5 retinaGCTTGCTGCC1.70.0017
P6.5 retinaGTAGACAATG1.70.0017
P6.5 retinaGTCACGATGT1.70.0017
P6.5 retinaTCCTCACGGG1.70.0017
P10.5 crx- retinaGCTGCCCTAG (2)3660.366
P10.5 crx- retinaGCTGCCCTAA (2)9.30.0093
P10.5 crx- retinaGCTTGCTGCC5.60.0056
P10.5 crx- retinaTCCTCACGGG3.70.0037
P10.5 crx- retinaTTGGCCAGGC3.70.0037
P10.5 crx- retinaAGGAGGTGAG1.90.0019
P10.5 crx- retinaGCATCCAGCC1.90.0019
P10.5 crx- retinaGCTGCCTTAG (2)1.90.0019
P10.5 crx- retinaGGCTGCCCTA1.90.0019
P10.5 crx- retinaGTAGACAATG1.90.0019
P10.5 crx- retinaTGCCCCCGGG1.90.0019
P10.5 crx+ retinaGCTGCCCTAG (2)1730.173
P10.5 crx+ retinaGCTGCCCTAA (2)7.70.0077
P10.5 crx+ retinaGCTTGCTGCC3.80.0038
P10.5 crx+ retinaAGCAGCTTTC1.90.0019
P10.5 crx+ retinaGTCACGATGT1.90.0019
P10.5 crx+ retinaGTTGCCCTAG1.90.0019
P10.5 crx+ retinaTTGGCCAGGC1.90.0019
Adult retinalGCTGCCCTAG (2)55.50.0555
Adult retinalATGAACACTG (9)11.10.0111
Adult retinalATGAGCAACA3.70.0037
Adult retinalGTAGACAATG1.90.0019
Adult retinalGTTGCCCTAG1.90.0019
ONLGCTGCCCTAG (2)26.80.0268
ONLATGAACACTG (9)13.40.0134
ONLATGAGCAACA3.80.0038
ONLGCTGCCTAGA1.90.0019
ONLGCTGTCCTAG (2)1.90.0019
ONLGTCACGATGT1.90.0019