Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.301282	Arid3a	AT rich interactive domain 3A (Bright like)	10		13496
Gene Ontology	DNA binding | intracellular | nucleus | regulation of transcription, DNA-dependent
Human Homolog	ARID3A[AT rich interactive domain 3A (BRIGHT- like)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 41 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGCTGGAGG (7) 1.6 0.0016 P8 Cb GC AATCCCGGCA 1.6 0.0016 P8 Cb GC CAGACTGGAG (3) 1.6 0.0016 Cb medulloblastoma AAGCTGGAGG (7) 2.3 0.0023 P8 GC+1d culture AAGCTGGAGG (7) 8 0.008 P8 GC+1d culture GCTGCCCACC (2) 2.3 0.0023 P8 GC+SHH+1d culture AAGCTGGAGG (7) 5.9 0.0059 P8 GC+SHH+1d culture AATCCCGGCA 1.2 0.0012 3T3 fibroblasts AAGCTGGAGG (7) 21 0.021 3T3 fibroblasts CAGACTGGAG (3) 3.5 0.0035 E15 cortex CAGACTGGAG (3) 4.9 0.0049 E15 cortex GCTGCCCACC (2) 4.9 0.0049 P1 cortex AAGCTGGAGG (7) 4.5 0.0045 P1 cortex CAGACTGGAG (3) 4.5 0.0045 Hypothalamus AAGCTGGAGG (7) 3.6 0.0036 E12.5 retina AAGCTGGAGG (7) 20.7 0.0207 E12.5 retina AAGCTGCAGG (8) 1.9 0.0019 E14.5 retina AAGCTGGAGG (7) 12.8 0.0128 E14.5 retina AAGCTGCAGG (8) 9.1 0.0091 E14.5 retina GCTGCCCACC (2) 1.8 0.0018 E16.5 retina AAGCTGGAGG (7) 7.2 0.0072 E16.5 retina AAGCTGCAGG (8) 1.8 0.0018 E18.5 retina AAGCTGCAGG (8) 14.6 0.0146 P0.5 retina AAGCTGCAGG (8) 21.6 0.0216 P0.5 retina AAGCTGGAGG (7) 3.9 0.0039 P0.5 retina GCTGCCCACC (2) 2 0.002 P2.5 retina AAGCTGCAGG (8) 7 0.007 P2.5 retina GCTGCCCACC (2) 3.5 0.0035 P2.5 retina AAGCTGGAGG (7) 1.8 0.0018 P2.5 retina AATCCCGGCA 1.8 0.0018 P4.5 retina AAGCTGCAGG (8) 13.9 0.0139 P6.5 retina AAGCTGCAGG (8) 8.3 0.0083 P6.5 retina AAGCTGGAGG (7) 1.7 0.0017 P10.5 crx- retina AAGCTGGAGG (7) 3.7 0.0037 P10.5 crx- retina AAGCTGCAGG (8) 1.9 0.0019 P10.5 crx- retina AATCCCGGCA 1.9 0.0019 P10.5 crx+ retina AAGCTGGAGG (7) 5.8 0.0058 Adult retinal AAGCTGCAGG (8) 9.3 0.0093 Adult retinal AAGCTGGAGG (7) 5.6 0.0056 ONL AAGCTGCAGG (8) 3.8 0.0038 ONL AAGCTGGAGG (7) 3.8 0.0038