Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.30129
Mbd5
methyl-CpG binding domain protein 5
2
109241
Human Homolog
MBD5[methyl-CpG binding domain protein 5]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 38 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTCTTCGAAT
(
2
)
4.9
0.0049
P8 Cb GC
AAGGGGAAGG (
6
)
1.6
0.0016
Cb medulloblastoma
GGGGGGGGGG (
112
)
6.9
0.0069
P8 GC+1d culture
ATGTCATCAA
(
4
)
13.7
0.0137
P8 GC+1d culture
GGGGGGGGGG (
112
)
2.3
0.0023
P8 GC+1d culture
AAGGGGAAGG (
6
)
1.1
0.0011
P8 GC+SHH+1d culture
ATGTCATCAA
(
4
)
12.9
0.0129
P8 GC+SHH+1d culture
GGGGGGGGGG (
112
)
7
0.007
P8 GC+SHH+1d culture
AAGGGGAAGG (
6
)
1.2
0.0012
3T3 fibroblasts
GGGGGGGGGG (
112
)
3.5
0.0035
E15 cortex
ATGTCATCAA
(
4
)
9.9
0.0099
E15 cortex
GGGGGGGGGG (
112
)
4.9
0.0049
E15 cortex
GTCTTCCAAT
4.9
0.0049
P1 cortex
ATGTCATCAA
(
4
)
9.1
0.0091
Hypothalamus
ATGTCATCAA
(
4
)
3.6
0.0036
Hypothalamus
AAGGGGAAGG (
6
)
1.8
0.0018
Hypothalamus
GGGGGGGGGG (
112
)
1.8
0.0018
E12.5 retina
ATGTCATCAA
(
4
)
11.3
0.0113
E14.5 retina
ATGTCATCAA
(
4
)
7.3
0.0073
E16.5 retina
ATGTCATCAA
(
4
)
10.9
0.0109
E16.5 retina
CCTGAGTGCA (
3
)
5.4
0.0054
E18.5 retina
ATGTCATCAA
(
4
)
7.3
0.0073
P0.5 retina
ATGTCATCAA
(
4
)
7.9
0.0079
P2.5 retina
GGGGGGGGGG (
112
)
7
0.007
P4.5 retina
GGGGGGGGGG (
112
)
9.9
0.0099
P4.5 retina
ATGTCATCAA
(
4
)
2
0.002
P6.5 retina
ATGTCATCAA
(
4
)
5
0.005
P6.5 retina
GGGGGGGGGG (
112
)
3.3
0.0033
P6.5 retina
GTCTTCCAAT
1.7
0.0017
P10.5 crx- retina
ATGTCATCAA
(
4
)
5.6
0.0056
P10.5 crx+ retina
GGGGGGGGGG (
112
)
9.6
0.0096
P10.5 crx+ retina
CCTGAGTGCA (
3
)
1.9
0.0019
P10.5 crx+ retina
GTCTTCCAAT
1.9
0.0019
Adult retinal
ATGTCATCAA
(
4
)
14.8
0.0148
Adult retinal
GGGGGGGGGG (
112
)
3.7
0.0037
Adult retinal
GTCTTCGAAT
(
2
)
1.9
0.0019
ONL
ATGTCATCAA
(
4
)
9.6
0.0096
ONL
GGGGGGGGGG (
112
)
1.9
0.0019
