| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CCACTAGTGG CTCATTCAGC (3) GCCGACGAGA (3) TAGGGCAATC (3) TCAACCAGAA (2)
| 135.4 | 0.1354 |
| Cb medulloblastoma | TAGGGCAATC (3) TCAACCAGAA (2)
| 69.4 | 0.0694 |
| P8 GC+1d culture | TAGGGCAATC (3) TCAACCAGAA (2)
| 77.6 | 0.0776 |
| P8 GC+SHH+1d culture | CTCATTCAGC (3) GCCGACGAGA (3) TAGGGCAATC (3) TCAACCAGAA (2)
| 81.9 | 0.0819 |
| 3T3 fibroblasts | TAGGGCAATC (3) TCAACCAGAA (2)
| 17.5 | 0.0175 |
| E15 cortex | GCCGACGAGA (3) TAGGGCAATC (3)
| 29.6 | 0.0296 |
| P1 cortex | TAGGGCAATC (3)
| 13.6 | 0.0136 |
| Hypothalamus | CCACTAGTGG TAGGGCAATC (3) TCAACCAGAA (2)
| 32.6 | 0.0326 |
| E12.5 retina | CCACTAGTGG TAGGGCAATC (3) TCAACCAGAA (2)
| 118.3 | 0.1183 |
| E14.5 retina | CCACTAGTGG TAGGGCAATC (3) TCAACCAGAA (2)
| 109.3 | 0.1093 |
| E16.5 retina | CCACTAGTGG CTCATTCAGC (3) GCCGACGAGA (3) TAGGGCAATC (3) TCAACCAGAA (2)
| 92.3 | 0.0923 |
| E18.5 retina | GCGAGCGCCG (3) TAGGGCAATC (3) TCAACCAGAA (2)
| 134.6 | 0.1346 |
| P0.5 retina | TAGGGCAATC (3)
| 94.2 | 0.0942 |
| P2.5 retina | CCACTAGTGG CTCATTCAGC (3) TAGGGCAATC (3) TCAACCAGAA (2)
| 102.1 | 0.1021 |
| P4.5 retina | GCGAGCGCCG (3) TAGGGCAATC (3)
| 109 | 0.109 |
| P6.5 retina | TAGGGCAATC (3) TCAACCAGAA (2)
| 73.4 | 0.0734 |
| P10.5 crx- retina | CTCATTCAGC (3) GCCGACGAGA (3) GCGAGCGCCG (3) TAGGGCAATC (3) TCAACCAGAA (2)
| 107.9 | 0.1079 |
| P10.5 crx+ retina | CTCATTCAGC (3) GCCGACGAGA (3) TAGGGCAATC (3) TCAACCAGAA (2)
| 90.3 | 0.0903 |
| Adult retinal | GCGAGCGCCG (3) TAGGGCAATC (3) TCAACCAGAA (2)
| 35.2 | 0.0352 |
| ONL | CTCATTCAGC (3) GCCGACGAGA (3) TAGGGCAATC (3) TCAACCAGAA (2)
| 36.4 | 0.0364 |