Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.30144	Tpbpb	trophoblast specific protein beta	13		116913
Gene Ontology	extracellular space
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 99 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGTCTTCAA CAATAAAACT CTGGACACTG (2) GCACAAACTA TCTCTAGCTG (3) 19.5 0.0195 Cb medulloblastoma GCACAAACTA TGCCTGTGTG TGCTGTGTTG 11.5 0.0115 P8 GC+1d culture ATGTCTTCAA CAATAAAACT CCAATAAAAA (3) CTGGACACTG (2) GCACAAACTA TACAAGCTGG TCTCTAGCTG (3) TGCTGTGTTG 20.5 0.0205 P8 GC+SHH+1d culture ATGTCTTCAA CTGGACACTG (2) GCACAAACTA TACAAGCTGG TCTCTAGCTG (3) TGCTGTGTTG 15.3 0.0153 3T3 fibroblasts CTGGACACTG (2) GCACAAACTA TACAAGCTGG TCTCTAGCTG (3) TGCTGTGTTG 42 0.042 E15 cortex CAATAAAATT (2) CTGGACACTG (2) TCTCTAGCTG (3) 19.7 0.0197 P1 cortex CAATAAAATT (2) CTGGACACTG (2) GCACAAACTA TCTCTAGCTG (3) TGCCTGTGTG TGCTGTGTTG 45.3 0.0453 Hypothalamus CAATAAAACT CAATAAACCT CTGGACACTG (2) GCACAAACTA TCTCTAGCTG (3) TGCTGTGTTG 25.3 0.0253 E12.5 retina CAATAAACCT CTGGACACTG (2) TACAAGCTGG TGCTGTGTTG 22.6 0.0226 E14.5 retina GCACAAACTA TCTCTAGCTG (3) TGCTGTGTTG 14.5 0.0145 E16.5 retina CTGGACACTG (2) TGCTGTGTTG 10.8 0.0108 E18.5 retina CCAATAAAAA (3) CTGGACACTG (2) TACAAGCTGG TCTCTAGCTG (3) TGCTGTGTTG 21.7 0.0217 P0.5 retina CTGGACACTG (2) GCACAAACTA TACAAGCTGG TCTCTAGCTG (3) TGCTGTGTTG 25.6 0.0256 P2.5 retina ATGTCTTCAA CAATAAACCT CTGGACACTG (2) GCACAAACTA TCTCTAGCTG (3) TGCTGTGTTG 36.9 0.0369 P4.5 retina CAATAAAACT CAATAAAATT (2) CTGGACACTG (2) TCTCTAGCTG (3) TGCCTGTGTG TGCTGTGTTG 17.9 0.0179 P6.5 retina ATGTCTTCAA CAATAAAATT (2) CCAATAAAAA (3) CTGGACACTG (2) TCTCTAGCTG (3) TGCCTGTGTG TGCTGTGTTG 33.5 0.0335 P10.5 crx- retina CTGGACACTG (2) TACAAGCTGG TCTCTAGCTG (3) TGCTGTGTTG 26.1 0.0261 P10.5 crx+ retina CAATAAAATT (2) CTGGACACTG (2) TCTCTAGCTG (3) TGCTGTGTTG 17.3 0.0173 Adult retinal CAATAAAACT CTGGACACTG (2) TCTCTAGCTG (3) TGCCTGTGTG TGCTGTGTTG 40.8 0.0408 ONL ATGTCTTCAA CAATAAAACT CTGGACACTG (2) TACAAGCTGG TCTCTAGCTG (3) TGCTGTGTTG 22.9 0.0229