Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.30155	Atp6v0c	ATPase, H+ transporting, V0 subunit C	17	7 2.0 cM	11984
Gene Ontology	ATP biosynthesis | ATP synthesis coupled proton transport | hydrogen ion transporter activity | hydrogen transport | hydrogen-exporting ATPase activity, phosphorylative mechanism | hydrogen-exporting ATPase activity, phosphorylative mechanism | hydrogen-translocating V-type ATPase complex | hydrogen-transporting ATP synthase activity, rotational mechanism | hydrogen-transporting ATPase activity, rotational mechanism | hydrolase activity | integral to membrane | ion transport | lysosomal lumen acidification | membrane | protein binding | proton transport | proton-transporting ATP synthase complex (sensu Eukarya) | proton-transporting two-sector ATPase complex | transport | vacuolar acidification
Human Homolog	ATP6V0C[ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 77 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CGTCTGTGGA (2) 29.4 0.0294 P8 Cb GC CACGGGCAGC (2) 4.9 0.0049 P8 Cb GC AATAGGTCAA 1.6 0.0016 P8 Cb GC GCGGGGGGGG (18) 1.6 0.0016 Cb medulloblastoma CGTCTGTGGA (2) 83.2 0.0832 Cb medulloblastoma CACGGGCAGC (2) 11.6 0.0116 Cb medulloblastoma ACCAGTCCCC (4) 4.6 0.0046 Cb medulloblastoma GCGGGGGGGG (18) 2.3 0.0023 P8 GC+1d culture CGTCTGTGGA (2) 63.9 0.0639 P8 GC+1d culture CACGGGCAGC (2) 16 0.016 P8 GC+1d culture CCCACGAACA (2) 2.3 0.0023 P8 GC+1d culture AAGTCCATCA (4) 1.1 0.0011 P8 GC+1d culture ACCAGTCCCC (4) 1.1 0.0011 P8 GC+1d culture GCTGACATCA (10) 1.1 0.0011 P8 GC+SHH+1d culture CGTCTGTGGA (2) 34 0.034 P8 GC+SHH+1d culture CACGGGCAGC (2) 5.9 0.0059 P8 GC+SHH+1d culture AAGTCCATCA (4) 1.2 0.0012 P8 GC+SHH+1d culture AATAGGTCAA 1.2 0.0012 P8 GC+SHH+1d culture GCTGACATCA (10) 1.2 0.0012 3T3 fibroblasts CGTCTGTGGA (2) 35 0.035 3T3 fibroblasts CACGGGCAGC (2) 10.5 0.0105 E15 cortex CGTCTGTGGA (2) 69.3 0.0693 P1 cortex CGTCTGTGGA (2) 118.2 0.1182 P1 cortex CACGGGCAGC (2) 4.5 0.0045 Hypothalamus CGTCTGTGGA (2) 50.7 0.0507 Hypothalamus CACGGGCAGC (2) 9.1 0.0091 Hypothalamus TGTCAGGCTG (2) 7.2 0.0072 Hypothalamus AAGTCCATCA (4) 5.4 0.0054 Hypothalamus AATAGGTCAA 1.8 0.0018 Hypothalamus ATCCTGATCC 1.8 0.0018 Hypothalamus CCCACGAACA (2) 1.8 0.0018 E12.5 retina CGTCTGTGGA (2) 24.4 0.0244 E12.5 retina AAAGTCATCA (2) 1.9 0.0019 E12.5 retina GCGGGGGGGG (18) 1.9 0.0019 E14.5 retina CGTCTGTGGA (2) 7.3 0.0073 E14.5 retina TGTCAGGCTG (2) 3.6 0.0036 E16.5 retina CGTCTGTGGA (2) 25.4 0.0254 E16.5 retina TGTCAGGCTG (2) 3.6 0.0036 E16.5 retina AAGTCCATCA (4) 1.8 0.0018 E16.5 retina CACGGGCAGC (2) 1.8 0.0018 E18.5 retina CGTCTGTGGA (2) 9.1 0.0091 E18.5 retina CACGGGCAGC (2) 1.8 0.0018 E18.5 retina CCCACGAACA (2) 1.8 0.0018 P0.5 retina CGTCTGTGGA (2) 37.3 0.0373 P0.5 retina CACGGGCAGC (2) 3.9 0.0039 P0.5 retina ATCCTGATCC 2 0.002 P2.5 retina CGTCTGTGGA (2) 45.8 0.0458 P2.5 retina CACGGGCAGC (2) 5.3 0.0053 P2.5 retina ACCAGTCCCC (4) 1.8 0.0018 P4.5 retina CGTCTGTGGA (2) 29.7 0.0297 P4.5 retina CACGGGCAGC (2) 7.9 0.0079 P6.5 retina CGTCTGTGGA (2) 61.7 0.0617 P6.5 retina CACGGGCAGC (2) 6.7 0.0067 P6.5 retina AATAGGTCAA 3.3 0.0033 P6.5 retina AAAGTCATCA (2) 1.7 0.0017 P6.5 retina GCGGGGGGGG (18) 1.7 0.0017 P10.5 crx- retina CGTCTGTGGA (2) 104 0.104 P10.5 crx- retina CACGGGCAGC (2) 5.6 0.0056 P10.5 crx- retina AATAGGTCAA 1.9 0.0019 P10.5 crx- retina ACCAGTCCCC (4) 1.9 0.0019 P10.5 crx- retina ATCCTGATCC 1.9 0.0019 P10.5 crx- retina GCTGACATCA (10) 1.9 0.0019 P10.5 crx+ retina CGTCTGTGGA (2) 113.4 0.1134 P10.5 crx+ retina CACGGGCAGC (2) 3.8 0.0038 P10.5 crx+ retina AAAGTCATCA (2) 1.9 0.0019 P10.5 crx+ retina ATCCTGATCC 1.9 0.0019 P10.5 crx+ retina CCCACGAACA (2) 1.9 0.0019 P10.5 crx+ retina GCGGGGGGGG (18) 1.9 0.0019 Adult retinal CGTCTGTGGA (2) 77.8 0.0778 Adult retinal CACGGGCAGC (2) 13 0.013 Adult retinal ACCAGTCCCC (4) 1.9 0.0019 ONL CGTCTGTGGA (2) 28.7 0.0287 ONL CACGGGCAGC (2) 11.5 0.0115 ONL AAAGTCATCA (2) 3.8 0.0038 ONL AATAGGTCAA 1.9 0.0019 ONL ACCAGTCCCC (4) 1.9 0.0019 ONL TGTCAGGCTG (2) 1.9 0.0019