Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.301646
D130056L21Rik
RIKEN cDNA D130056L21 gene
2
320123
Mm.301646
9130404D14Rik
RIKEN cDNA 9130404D14 gene
2
227737
Human Homolog
C9orf88[chromosome 9 open reading frame 88]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 24 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTCTCTAGTG
(
3
)
3.3
0.0033
Cb medulloblastoma
GTTCTGCACA
(
4
)
2.3
0.0023
P8 GC+1d culture
AATCTGAACG
(
2
)
GTTCTGCACA
(
4
)
TTCTCTAGTG
(
3
)
19.5
0.0195
P8 GC+SHH+1d culture
AATCTGAACG
(
2
)
TTCTCTAGTG
(
3
)
8.2
0.0082
3T3 fibroblasts
AATCTGAACG
(
2
)
10.5
0.0105
P1 cortex
AATCTGAACG
(
2
)
4.5
0.0045
Hypothalamus
AATCTGAACG
(
2
)
1.8
0.0018
E14.5 retina
TTCTCTAGTG
(
3
)
1.8
0.0018
E18.5 retina
TTCTCTAGTG
(
3
)
1.8
0.0018
P0.5 retina
AAAGCAGTGG
(
2
)
2
0.002
P2.5 retina
TTCTCTAGTG
(
3
)
1.8
0.0018
P4.5 retina
GTTCTGCACA
(
4
)
2
0.002
P6.5 retina
TTCTCTAGTG
(
3
)
1.7
0.0017
P10.5 crx- retina
AAAGCAGTGG
(
2
)
AATCTGAACG
(
2
)
GTTCTGCACA
(
4
)
TTCTCTAGTG
(
3
)
9.4
0.0094
P10.5 crx+ retina
AATCTGAACG
(
2
)
GTTCTGCACA
(
4
)
TTCTCTAGTG
(
3
)
7.6
0.0076
Adult retinal
TTCTCTAGTG
(
3
)
1.9
0.0019
