Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.302287
Lrrfip2
leucine rich repeat (in FLII) interacting protein 2
9
71268
Human Homolog
LRRFIP2[leucine rich repeat (in FLII) interacting protein 2]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 37 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TAATTTTTTT (
7
)
9.8
0.0098
Cb medulloblastoma
TAATTTTTTT (
7
)
4.6
0.0046
P8 GC+1d culture
TAATTTTTTT (
7
)
32
0.032
P8 GC+1d culture
CACACAAACA (
4
)
1.1
0.0011
P8 GC+1d culture
TCCGGGGACC
1.1
0.0011
P8 GC+SHH+1d culture
TAATTTTTTT (
7
)
22.2
0.0222
P8 GC+SHH+1d culture
TCCGGGGACC
5.9
0.0059
P8 GC+SHH+1d culture
TAGCAAAGTT (
2
)
1.2
0.0012
3T3 fibroblasts
TCCGGGGACC
3.5
0.0035
P1 cortex
TAATTTTTTT (
7
)
27.3
0.0273
P1 cortex
GGAATGATTA
4.5
0.0045
P1 cortex
TAGCAAAGTT (
2
)
4.5
0.0045
Hypothalamus
TAATTTTTTT (
7
)
12.7
0.0127
Hypothalamus
CACACAAACA (
4
)
1.8
0.0018
Hypothalamus
TCCGGGGACC
1.8
0.0018
E12.5 retina
TAATTTTTTT (
7
)
9.4
0.0094
E14.5 retina
TAATTTTTTT (
7
)
16.4
0.0164
E14.5 retina
GGAATGATTA
1.8
0.0018
E14.5 retina
TAGCAAAGTT (
2
)
1.8
0.0018
E16.5 retina
TAATTTTTTT (
7
)
9.1
0.0091
E18.5 retina
TAATTTTTTT (
7
)
23.6
0.0236
E18.5 retina
TAGCAAAGTT (
2
)
1.8
0.0018
P0.5 retina
TAATTTTTTT (
7
)
13.7
0.0137
P2.5 retina
TAATTTTTTT (
7
)
19.4
0.0194
P2.5 retina
CACACAAACA (
4
)
1.8
0.0018
P2.5 retina
GGGAAGGAGA (
5
)
1.8
0.0018
P4.5 retina
TAATTTTTTT (
7
)
13.9
0.0139
P6.5 retina
TAATTTTTTT (
7
)
1.7
0.0017
P6.5 retina
TCCGGGGACC
1.7
0.0017
P10.5 crx- retina
TAATTTTTTT (
7
)
9.3
0.0093
P10.5 crx- retina
GGGAAGGAGA (
5
)
1.9
0.0019
P10.5 crx+ retina
TAATTTTTTT (
7
)
5.8
0.0058
P10.5 crx+ retina
GGGAAGGAGA (
5
)
1.9
0.0019
P10.5 crx+ retina
TCCGGGGACC
1.9
0.0019
Adult retinal
GGAATGATTA
1.9
0.0019
Adult retinal
TAATTTTTTT (
7
)
1.9
0.0019
ONL
TAATTTTTTT (
7
)
3.8
0.0038
