Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.30234
Ik
IK cytokine
18
24010
Human Homolog
IK[IK cytokine, down-regulator of HLA II]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 68 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTTTAATCC (
355
)
52.2
0.0522
P8 Cb GC
TTCCATTAAA
(
2
)
6.5
0.0065
P8 Cb GC
AAAGTTCTAA (
4
)
1.6
0.0016
P8 Cb GC
AGACTGCCAA (
2
)
1.6
0.0016
P8 Cb GC
AGTTCAAGTC (
6
)
1.6
0.0016
Cb medulloblastoma
CCTTTAATCC (
355
)
41.6
0.0416
Cb medulloblastoma
TTCCATTAAA
(
2
)
18.5
0.0185
Cb medulloblastoma
AAAGTTCTAA (
4
)
2.3
0.0023
P8 GC+1d culture
CCTTTAATCC (
355
)
32
0.032
P8 GC+1d culture
TTCCATTAAA
(
2
)
6.8
0.0068
P8 GC+1d culture
AGACTGCCAA (
2
)
2.3
0.0023
P8 GC+SHH+1d culture
CCTTTAATCC (
355
)
25.8
0.0258
P8 GC+SHH+1d culture
TTCCATTAAA
(
2
)
9.4
0.0094
P8 GC+SHH+1d culture
AGACTGCCAA (
2
)
2.3
0.0023
P8 GC+SHH+1d culture
AGATGCCAAG
1.2
0.0012
P8 GC+SHH+1d culture
TGGGACACAG
(
6
)
1.2
0.0012
3T3 fibroblasts
CCTTTAATCC (
355
)
70.1
0.0701
3T3 fibroblasts
GTCATAGCTG (
590
)
10.5
0.0105
3T3 fibroblasts
AGATGCCAAG
3.5
0.0035
E15 cortex
CCTTTAATCC (
355
)
54.4
0.0544
E15 cortex
AGATGCCAAG
9.9
0.0099
E15 cortex
GTCATAGCTG (
590
)
4.9
0.0049
E15 cortex
TTCCATTAAA
(
2
)
4.9
0.0049
P1 cortex
CCTTTAATCC (
355
)
154.5
0.1545
P1 cortex
TTCCATTAAA
(
2
)
4.5
0.0045
Hypothalamus
CCTTTAATCC (
355
)
19.9
0.0199
Hypothalamus
TTCCATTAAA
(
2
)
7.2
0.0072
E12.5 retina
CCTTTAATCC (
355
)
75.1
0.0751
E12.5 retina
TTCCATTAAA
(
2
)
7.5
0.0075
E12.5 retina
AGATGCCAAG
3.8
0.0038
E14.5 retina
CCTTTAATCC (
355
)
120.3
0.1203
E14.5 retina
TTCCATTAAA
(
2
)
20
0.02
E14.5 retina
AAAGTTCTAA (
4
)
1.8
0.0018
E14.5 retina
AGTTCAAGTC (
6
)
1.8
0.0018
E16.5 retina
CCTTTAATCC (
355
)
68.8
0.0688
E16.5 retina
TTCCATTAAA
(
2
)
10.9
0.0109
E16.5 retina
TGGGACACAG
(
6
)
1.8
0.0018
E18.5 retina
CCTTTAATCC (
355
)
23.6
0.0236
E18.5 retina
TTCCATTAAA
(
2
)
18.2
0.0182
E18.5 retina
TGGGACACAG
(
6
)
1.8
0.0018
P0.5 retina
CCTTTAATCC (
355
)
72.6
0.0726
P0.5 retina
GTCATAGCTG (
590
)
3.9
0.0039
P2.5 retina
CCTTTAATCC (
355
)
70.4
0.0704
P2.5 retina
TTCCATTAAA
(
2
)
12.3
0.0123
P2.5 retina
AGATGCCAAG
3.5
0.0035
P2.5 retina
AGTTCAAGTC (
6
)
3.5
0.0035
P2.5 retina
GTCATAGCTG (
590
)
1.8
0.0018
P4.5 retina
CCTTTAATCC (
355
)
43.6
0.0436
P4.5 retina
TTCCATTAAA
(
2
)
19.8
0.0198
P4.5 retina
AGACTGCCAA (
2
)
2
0.002
P4.5 retina
GTCATAGCTG (
590
)
2
0.002
P6.5 retina
CCTTTAATCC (
355
)
70
0.07
P6.5 retina
TTCCATTAAA
(
2
)
20
0.02
P6.5 retina
AAAGTTCTAA (
4
)
3.3
0.0033
P6.5 retina
GTCATAGCTG (
590
)
3.3
0.0033
P10.5 crx- retina
CCTTTAATCC (
355
)
63.2
0.0632
P10.5 crx- retina
TTCCATTAAA
(
2
)
7.4
0.0074
P10.5 crx- retina
TGGGACACAG
(
6
)
1.9
0.0019
P10.5 crx+ retina
CCTTTAATCC (
355
)
38.4
0.0384
P10.5 crx+ retina
TTCCATTAAA
(
2
)
3.8
0.0038
Adult retinal
CCTTTAATCC (
355
)
129.6
0.1296
Adult retinal
TTCCATTAAA
(
2
)
11.1
0.0111
Adult retinal
AGTTCAAGTC (
6
)
3.7
0.0037
Adult retinal
GTCATAGCTG (
590
)
1.9
0.0019
Adult retinal
TGGGACACAG
(
6
)
1.9
0.0019
ONL
CCTTTAATCC (
355
)
84.3
0.0843
ONL
GTCATAGCTG (
590
)
5.7
0.0057
ONL
TTCCATTAAA
(
2
)
5.7
0.0057
