Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.30249	Galnt1	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1	18		14423
Gene Ontology	extracellular space | Golgi apparatus | integral to membrane | manganese ion binding | O-linked glycosylation | polypeptide N-acetylgalactosaminyltransferase activity | sugar binding | transferase activity | transferase activity, transferring glycosyl groups
Human Homolog	GALNT1[UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 43 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  Cb medulloblastoma CTCAAAAAAA (2) 6.9 0.0069 P8 GC+1d culture CCCAAGACTC (2) CTCAAAAAAA (2) CTCAGAAAAA GGTACTTTTA (4) TTAAGAAACT 11.3 0.0113 P8 GC+SHH+1d culture CTCAAAAAAA (2) GATGCTTCTA GGTACTTTTA (4) TTAAGAAACT 7 0.007 3T3 fibroblasts CTCAAAAAAA (2) 3.5 0.0035 P1 cortex AAAATAATTT (2) 4.5 0.0045 Hypothalamus AAAATAATTT (2) GGGAGTCTCT TTAAGAAACT 7.2 0.0072 E12.5 retina CTCAAAAAAA (2) GATGCTTCTA GGGAGTCTCT GGTACTTTTA (4) 7.6 0.0076 E14.5 retina AAAATAATTT (2) CCCAAGACTC (2) CTCAAAAAAA (2) CTCAGAAAAA 7.2 0.0072 E16.5 retina CTCAGAAAAA GGTACTTTTA (4) TTAAGAAACT 7.2 0.0072 E18.5 retina AAAATAATTT (2) CTCAAAAAAA (2) CTCAGAAAAA GATGCTTCTA 7.2 0.0072 P0.5 retina GGTACTTTTA (4) 3.9 0.0039 P2.5 retina CTCAAAAAAA (2) 1.8 0.0018 P4.5 retina CTCAAAAAAA (2) CTCAGAAAAA GGTACTTTTA (4) 9.9 0.0099 P6.5 retina GATGCTTCTA 1.7 0.0017 P10.5 crx- retina AAAATAATTT (2) 1.9 0.0019 P10.5 crx+ retina GATGCTTCTA GGGAGTCTCT GGTACTTTTA (4) 5.7 0.0057 Adult retinal CCCAAGACTC (2) CTCAAAAAAA (2) 3.8 0.0038 ONL CTCAAAAAAA (2) 1.9 0.0019