Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.30256
AA589622
EST AA589622
6
57892
Mm.30256
2810422B04Rik
RIKEN cDNA 2810422B04 gene
6
69956
Human Homolog
FLJ20758[FLJ20758 protein]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 45 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGTTGCTGG (
369
)
68.5
0.0685
P8 Cb GC
GAGATGGGTT
(
4
)
3.3
0.0033
Cb medulloblastoma
TGGTTGCTGG (
369
)
113.3
0.1133
Cb medulloblastoma
GAGATGGGTT
(
4
)
6.9
0.0069
P8 GC+1d culture
TGGTTGCTGG (
369
)
57.1
0.0571
P8 GC+1d culture
GAGATGGGTT
(
4
)
5.7
0.0057
P8 GC+1d culture
GCCAGGGATA (
3
)
1.1
0.0011
P8 GC+1d culture
TGATGCATTT (
4
)
1.1
0.0011
P8 GC+SHH+1d culture
TGGTTGCTGG (
369
)
89
0.089
P8 GC+SHH+1d culture
GAGATGGGTT
(
4
)
4.7
0.0047
3T3 fibroblasts
TGGTTGCTGG (
369
)
220.8
0.2208
3T3 fibroblasts
GAGATGGGTT
(
4
)
3.5
0.0035
E15 cortex
TGGTTGCTGG (
369
)
277.1
0.2771
P1 cortex
TGGTTGCTGG (
369
)
86.4
0.0864
Hypothalamus
TGGTTGCTGG (
369
)
349.6
0.3496
Hypothalamus
GAGATGGGTT
(
4
)
1.8
0.0018
E12.5 retina
TGGTTGCTGG (
369
)
157.7
0.1577
E12.5 retina
GAGATGGGTT
(
4
)
7.5
0.0075
E12.5 retina
GCCAGGGATA (
3
)
1.9
0.0019
E14.5 retina
TGGTTGCTGG (
369
)
936.5
0.9365
E14.5 retina
GAGATGGGTT
(
4
)
3.6
0.0036
E16.5 retina
TGGTTGCTGG (
369
)
767.9
0.7679
E16.5 retina
GAGATGGGTT
(
4
)
7.2
0.0072
E18.5 retina
TGGTTGCTGG (
369
)
252.8
0.2528
E18.5 retina
GAGATGGGTT
(
4
)
3.6
0.0036
P0.5 retina
TGGTTGCTGG (
369
)
190.4
0.1904
P0.5 retina
GAGATGGGTT
(
4
)
5.9
0.0059
P0.5 retina
TGATGCATTT (
4
)
2
0.002
P2.5 retina
TGGTTGCTGG (
369
)
165.4
0.1654
P2.5 retina
GAGATGGGTT
(
4
)
3.5
0.0035
P4.5 retina
TGGTTGCTGG (
369
)
150.6
0.1506
P4.5 retina
GAGATGGGTT
(
4
)
4
0.004
P4.5 retina
TGATGCATTT (
4
)
2
0.002
P6.5 retina
TGGTTGCTGG (
369
)
156.7
0.1567
P6.5 retina
GAGATGGGTT
(
4
)
3.3
0.0033
P6.5 retina
TGATGCATTT (
4
)
3.3
0.0033
P10.5 crx- retina
TGGTTGCTGG (
369
)
280.5
0.2805
P10.5 crx- retina
GAGATGGGTT
(
4
)
1.9
0.0019
P10.5 crx+ retina
TGGTTGCTGG (
369
)
101.9
0.1019
P10.5 crx+ retina
GAGATGGGTT
(
4
)
1.9
0.0019
Adult retinal
TGGTTGCTGG (
369
)
214.8
0.2148
Adult retinal
GAGATGGGTT
(
4
)
3.7
0.0037
Adult retinal
TGATGCATTT (
4
)
1.9
0.0019
ONL
TGGTTGCTGG (
369
)
398.4
0.3984
ONL
GCCAGGGATA (
3
)
1.9
0.0019
