Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.30264	Chfr	checkpoint with forkhead and ring finger domains	5		231600
Gene Ontology	cell cycle | ligase activity | mitosis | nucleus | protein ubiquitination | ubiquitin ligase complex | ubiquitin-protein ligase activity | zinc ion binding
Human Homolog	CHFR[checkpoint with forkhead and ring finger domains]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 51 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTTATTTGT (7) 8.2 0.0082 P8 Cb GC GCAAACCTAA (3) 3.3 0.0033 P8 Cb GC GCCAAACCTA (2) 1.6 0.0016 P8 Cb GC TCATCTGGAA (2) 1.6 0.0016 Cb medulloblastoma GGGGGGGGGG (112) 6.9 0.0069 Cb medulloblastoma GCAAACCTAA (3) 4.6 0.0046 P8 GC+1d culture TTTTATTTGT (7) 6.8 0.0068 P8 GC+1d culture TCATCTGGAA (2) 4.6 0.0046 P8 GC+1d culture GGGGGGGGGG (112) 2.3 0.0023 P8 GC+1d culture GCAAACCTAA (3) 1.1 0.0011 P8 GC+SHH+1d culture GGGGGGGGGG (112) 7 0.007 P8 GC+SHH+1d culture TTTTATTTGT (7) 7 0.007 P8 GC+SHH+1d culture TCATCTGGAA (2) 2.3 0.0023 P8 GC+SHH+1d culture GCAAACCTAA (3) 1.2 0.0012 3T3 fibroblasts GGGGGGGGGG (112) 3.5 0.0035 3T3 fibroblasts TCATCTGGAA (2) 3.5 0.0035 E15 cortex GGGGGGGGGG (112) 4.9 0.0049 Hypothalamus TTTTATTTGT (7) 5.4 0.0054 Hypothalamus TCATCTGGAA (2) 3.6 0.0036 Hypothalamus GGGGGGGGGG (112) 1.8 0.0018 E12.5 retina TTTTATTTGT (7) 9.4 0.0094 E12.5 retina TCATCTGGAA (2) 3.8 0.0038 E14.5 retina TTTTATTTGT (7) 21.9 0.0219 E14.5 retina GCAAACCTAA (3) 1.8 0.0018 E14.5 retina GGAAACCTAA (3) 1.8 0.0018 E16.5 retina TTTTATTTGT (7) 14.5 0.0145 E16.5 retina GGAAACCTAA (3) 1.8 0.0018 E18.5 retina TTTTATTTGT (7) 12.7 0.0127 E18.5 retina TCATCTGGAA (2) 3.6 0.0036 P0.5 retina TTTTATTTGT (7) 9.8 0.0098 P0.5 retina GCCAAACCTA (2) 2 0.002 P0.5 retina TCATCTGGAA (2) 2 0.002 P2.5 retina TTTTATTTGT (7) 12.3 0.0123 P2.5 retina GGGGGGGGGG (112) 7 0.007 P2.5 retina TCATCTGGAA (2) 3.5 0.0035 P4.5 retina GGGGGGGGGG (112) 9.9 0.0099 P4.5 retina TCATCTGGAA (2) 4 0.004 P4.5 retina TTTTATTTGT (7) 2 0.002 P6.5 retina GGGGGGGGGG (112) 3.3 0.0033 P6.5 retina TCATCTGGAA (2) 3.3 0.0033 P10.5 crx- retina TTTTATTTGT (7) 9.3 0.0093 P10.5 crx- retina TCATCTGGAA (2) 5.6 0.0056 P10.5 crx+ retina GGGGGGGGGG (112) 9.6 0.0096 P10.5 crx+ retina TCATCTGGAA (2) 9.6 0.0096 P10.5 crx+ retina GCCAAACCTA (2) 3.8 0.0038 P10.5 crx+ retina GCAAACCTAA (3) 1.9 0.0019 Adult retinal GGGGGGGGGG (112) 3.7 0.0037 Adult retinal GCAAACCTAA (3) 1.9 0.0019 Adult retinal TTTTATTTGT (7) 1.9 0.0019 ONL GGGGGGGGGG (112) 1.9 0.0019 ONL TCATCTGGAA (2) 1.9 0.0019