Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3035	3110006P09Rik	RIKEN cDNA 3110006P09 gene	15		68036
Human Homolog	LOC51123[HSPC038 protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 108 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTAGCTGAC 14.7 0.0147 P8 Cb GC CAAAGACAAC 4.9 0.0049 P8 Cb GC TGCCAAGGGT (7) 1.6 0.0016 Cb medulloblastoma TTTAGCTGAC 34.7 0.0347 Cb medulloblastoma TGCCAAGGGT (7) 9.2 0.0092 Cb medulloblastoma CAAAGACAAC 2.3 0.0023 P8 GC+1d culture TTTAGCTGAC 25.1 0.0251 P8 GC+1d culture TGCCAAGGGT (7) 11.4 0.0114 P8 GC+1d culture CAAAGACAAC 4.6 0.0046 P8 GC+1d culture CCACGTCATA (5) 3.4 0.0034 P8 GC+1d culture AAGCCCAAAG (7) 1.1 0.0011 P8 GC+1d culture GTAATTTAAA 1.1 0.0011 P8 GC+SHH+1d culture TGCCAAGGGT (7) 16.4 0.0164 P8 GC+SHH+1d culture TTTAGCTGAC 15.2 0.0152 P8 GC+SHH+1d culture CAAAGACAAC 7 0.007 P8 GC+SHH+1d culture CAGTTTGTAC (7) 2.3 0.0023 P8 GC+SHH+1d culture CCACGTCATA (5) 2.3 0.0023 P8 GC+SHH+1d culture AAGCCCAAAG (7) 1.2 0.0012 P8 GC+SHH+1d culture GGGATGAGAA (2) 1.2 0.0012 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts TGCCAAGGGT (7) 7 0.007 3T3 fibroblasts AAGCCCAAAG (7) 3.5 0.0035 3T3 fibroblasts CCACGTCATA (5) 3.5 0.0035 E15 cortex TTTAGCTGAC 9.9 0.0099 E15 cortex AAGCCCAAAG (7) 4.9 0.0049 E15 cortex CAAAGACAAC 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 E15 cortex TGCCAAGGGT (7) 4.9 0.0049 P1 cortex CAAAGACAAC 4.5 0.0045 P1 cortex GGGATGAGAA (2) 4.5 0.0045 Hypothalamus TTTAGCTGAC 23.5 0.0235 Hypothalamus CAAAGACAAC 9.1 0.0091 Hypothalamus CAGTTTGTAC (7) 5.4 0.0054 Hypothalamus TGCCAAGGGT (7) 3.6 0.0036 Hypothalamus CCACGTCATA (5) 1.8 0.0018 Hypothalamus GGGATGAAAA (2) 1.8 0.0018 Hypothalamus GGGATGAGAA (2) 1.8 0.0018 E12.5 retina TTTAGCTGAC 28.2 0.0282 E12.5 retina CAAAGACAAC 13.1 0.0131 E12.5 retina CAAAGACAAA (4) 5.6 0.0056 E12.5 retina CCACGTCATA (5) 3.8 0.0038 E12.5 retina GGGATGAGAA (2) 1.9 0.0019 E14.5 retina TTTAGCTGAC 32.8 0.0328 E14.5 retina CAAAGACAAC 10.9 0.0109 E14.5 retina AAGCCCAAAG (7) 3.6 0.0036 E14.5 retina GGGATGAGAA (2) 1.8 0.0018 E14.5 retina GTAATTTAAA 1.8 0.0018 E14.5 retina TGCCAAGGGT (7) 1.8 0.0018 E16.5 retina TTTAGCTGAC 27.2 0.0272 E16.5 retina TGCCAAGGGT (7) 9.1 0.0091 E16.5 retina CAAAGACAAC 7.2 0.0072 E16.5 retina GGGATGAGAA (2) 3.6 0.0036 E16.5 retina CAGTTTGTAC (7) 1.8 0.0018 E18.5 retina TTTAGCTGAC 32.7 0.0327 E18.5 retina CAAAGACAAC 5.5 0.0055 E18.5 retina AAGCCCAAAG (7) 3.6 0.0036 E18.5 retina CAAAGACAAA (4) 1.8 0.0018 E18.5 retina CCACGTCATA (5) 1.8 0.0018 E18.5 retina GGGATGAGAA (2) 1.8 0.0018 P0.5 retina CAAAGACAAC 11.8 0.0118 P0.5 retina TGCCAAGGGT (7) 5.9 0.0059 P0.5 retina TTTAGCTGAC 5.9 0.0059 P0.5 retina AAGCCCAAAG (7) 3.9 0.0039 P0.5 retina ACCAACAGGC 3.9 0.0039 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P2.5 retina TTTAGCTGAC 15.8 0.0158 P2.5 retina TGCCAAGGGT (7) 7 0.007 P2.5 retina AAGCCCAAAG (7) 1.8 0.0018 P2.5 retina CAAAGACAAC 1.8 0.0018 P2.5 retina GGGATGAAAA (2) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina TTTAGCTGAC 27.7 0.0277 P4.5 retina TGCCAAGGGT (7) 9.9 0.0099 P4.5 retina AAGCCCAAAG (7) 4 0.004 P4.5 retina CAAAGACAAA (4) 4 0.004 P4.5 retina CAAAGACAAC 4 0.004 P4.5 retina GGGATGAGAA (2) 4 0.004 P4.5 retina ACCAACAGGC 2 0.002 P4.5 retina CCACGTCATA (5) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P6.5 retina TTTAGCTGAC 18.3 0.0183 P6.5 retina AAGCCCAAAG (7) 6.7 0.0067 P6.5 retina CAAAGACAAA (4) 3.3 0.0033 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina TGCCAAGGGT (7) 3.3 0.0033 P6.5 retina CAAAGACAAC 1.7 0.0017 P6.5 retina CAGTTTGTAC (7) 1.7 0.0017 P10.5 crx- retina TTTAGCTGAC 22.3 0.0223 P10.5 crx- retina TGCCAAGGGT (7) 9.3 0.0093 P10.5 crx- retina CAAAGACAAC 3.7 0.0037 P10.5 crx- retina CAGTTTGTAC (7) 1.9 0.0019 P10.5 crx- retina GGGATGAGAA (2) 1.9 0.0019 P10.5 crx+ retina TTTAGCTGAC 26.9 0.0269 P10.5 crx+ retina TGCCAAGGGT (7) 15.4 0.0154 P10.5 crx+ retina AAGCCCAAAG (7) 3.8 0.0038 P10.5 crx+ retina CAGTTTGTAC (7) 3.8 0.0038 P10.5 crx+ retina CCACGTCATA (5) 1.9 0.0019 P10.5 crx+ retina GGGATGAAAA (2) 1.9 0.0019 Adult retinal TGCCAAGGGT (7) 11.1 0.0111 Adult retinal CAAAGACAAC 7.4 0.0074 Adult retinal TTTAGCTGAC 7.4 0.0074 Adult retinal CAGTTTGTAC (7) 1.9 0.0019 Adult retinal GGGATGAGAA (2) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL TGCCAAGGGT (7) 9.6 0.0096 ONL TTTAGCTGAC 7.7 0.0077 ONL GTCATAGCTG (590) 5.7 0.0057 ONL GTAATTTAAA 1.9 0.0019