Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.30478	Rpl39	ribosomal protein L39	X		67248
Gene Ontology	cytosolic large ribosomal subunit (sensu Eukarya) | intracellular | protein biosynthesis | ribosome | RNA binding | structural constituent of ribosome
Human Homolog	RPL39[ribosomal protein L39]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 121 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (2) GAGCACATCC GCGAGAAGCC TCAAAAAAAA (2) TCTTCTCACA TCTTTTTCAC 270.7 0.2707 Cb medulloblastoma AAAAAAAAAA (2) GCGAGAAGCC TCAAAAAAAA (2) TCTTCTCACA 913.4 0.9134 P8 GC+1d culture AAAAAAAAAA (2) GAGCACATCC GCCAGTACCC GCGAGAAGCC TCAAAAAAAA (2) TCTAGTCATA (2) TCTTCTCACA 265.9 0.2659 P8 GC+SHH+1d culture AAAAAAAAAA (2) GAGCACATCC GCCAGTACCC GCGAGAAGCC GCGGGGGCCA TCAAAAAAAA (2) TCTAGTCATA (2) TCTTCTCACA TTTCTTTTTT 370.2 0.3702 3T3 fibroblasts AAAAAAAAAA (2) GAGCACATCC GCCAGTACCC GCGAGAAGCC TCAAAAAAAA (2) TCTTCTCACA 108.6 0.1086 E15 cortex AAAAAAAAAA (2) CGTCCTTTTT GCCAGTACCC TCAAAAAAAA (2) TCTTCTCACA 262.1 0.2621 P1 cortex AAAAAAAAAA (2) GAGCACATCC GCCAGTACCC GCGAGAAGCC TCAAAAAAAA (2) TCTTCTCACA 331.7 0.3317 Hypothalamus AAAAAAAAAA (2) CGTCCTTTTT GAGCACATCC GCGAGAAGCC GCGGGGGCCA TCAAAAAAAA (2) TCTAGTCATA (2) TCTTCTCACA 186.4 0.1864 E12.5 retina AAAAAAAAAA (2) GAGCACATCC GCGAGAAGCC TCAAAAAAAA (2) TCTTCTCACA 225.3 0.2253 E14.5 retina AAAAAAAAAA (2) GAGCACATCC GCGAGAAGCC TCAAAAAAAA (2) TCTAGTCATA (2) 151.1 0.1511 E16.5 retina AAAAAAAAAA (2) GAGCACATCC GCGAGAAGCC TCAAAAAAAA (2) TCTTCTCACA 74.2 0.0742 E18.5 retina AAAAAAAAAA (2) GAGCACATCC GCGAGAAGCC TCAAAAAAAA (2) TCTAGTCATA (2) TCTTCTCACA TTTCTTTTTT 454.7 0.4547 P0.5 retina AAAAAAAAAA (2) GAGCACATCC GCCAGTACCC GCGAGAAGCC TCAAAAAAAA (2) TCTTCTCACA 218 0.218 P2.5 retina AAAAAAAAAA (2) GAGCACATCC GCGAGAAGCC GCGGGGGCCA TCAAAAAAAA (2) TCTAGTCATA (2) TCTTCTCACA 396 0.396 P4.5 retina AAAAAAAAAA (2) GCGAGAAGCC TCAAAAAAAA (2) TCTAGTCATA (2) TCTTCTCACA 350.6 0.3506 P6.5 retina AAAAAAAAAA (2) GCGAGAAGCC GCGGGGGCCA TCAAAAAAAA (2) TCTTCTCACA 311.8 0.3118 P10.5 crx- retina AAAAAAAAAA (2) GAGCACATCC GCCAGTACCC GCGAGAAGCC TCAAAAAAAA (2) TCTAGTCATA (2) TCTTCTCACA 74.5 0.0745 P10.5 crx+ retina AAAAAAAAAA (2) GCCAGTACCC GCGAGAAGCC TCAAAAAAAA (2) TCTAGTCATA (2) TCTTCTCACA 161.4 0.1614 Adult retinal AAAAAAAAAA (2) GCCAGTACCC GCGAGAAGCC GCGGGGGCCA TCAAAAAAAA (2) TCTAGTCATA (2) TCTTCTCACA 103.9 0.1039 ONL AAAAAAAAAA (2) GCGAGAAGCC TCAAAAAAAA (2) TCTTCTCACA TCTTTTTCAC 145.4 0.1454