Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.30501
Mfap3
microfibrillar-associated protein 3
11
216760
Mm.30501
2610509F16Rik
RIKEN cDNA 2610509F16 gene
11
108996
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 90 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGGTTCTGAC (
5
)
17.9
0.0179
P8 Cb GC
TCTGGCACTG (
6
)
6.5
0.0065
P8 Cb GC
TGCTGGTGCA
(
3
)
4.9
0.0049
P8 Cb GC
CAGCCTGCCC (
4
)
1.6
0.0016
Cb medulloblastoma
TCTGGCACTG (
6
)
16.2
0.0162
Cb medulloblastoma
GGGTTCTGAC (
5
)
11.6
0.0116
Cb medulloblastoma
CCAGCCTTCA (
15
)
2.3
0.0023
Cb medulloblastoma
CTGTCTAGAG
(
4
)
2.3
0.0023
P8 GC+1d culture
GGGTTCTGAC (
5
)
27.4
0.0274
P8 GC+1d culture
TCTGGCACTG (
6
)
5.7
0.0057
P8 GC+1d culture
CTGTCTAGAG
(
4
)
3.4
0.0034
P8 GC+1d culture
CCAGCCTTCA (
15
)
2.3
0.0023
P8 GC+1d culture
TGCTGGTGCA
(
3
)
2.3
0.0023
P8 GC+1d culture
CTAGCCTTCA
(
3
)
1.1
0.0011
P8 GC+1d culture
GGAGAGAGAA
(
11
)
1.1
0.0011
P8 GC+SHH+1d culture
GGGTTCTGAC (
5
)
36.3
0.0363
P8 GC+SHH+1d culture
TCTGGCACTG (
6
)
12.9
0.0129
P8 GC+SHH+1d culture
CCAGCCTTCA (
15
)
4.7
0.0047
P8 GC+SHH+1d culture
TGCTGGTGCA
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
CTGTCTAGAG
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
GGAGAGAGAA
(
11
)
1.2
0.0012
3T3 fibroblasts
CTAGCCTTCA
(
3
)
10.5
0.0105
3T3 fibroblasts
TGCTGGTGCA
(
3
)
7
0.007
E15 cortex
TCTGGCACTG (
6
)
19.8
0.0198
E15 cortex
CAGCCTGCCC (
4
)
9.9
0.0099
E15 cortex
TGCTGGTGCA
(
3
)
9.9
0.0099
E15 cortex
CTGTCTAGAG
(
4
)
4.9
0.0049
P1 cortex
AAATCTTTGC (
3
)
4.5
0.0045
P1 cortex
GGGTTCTGAC (
5
)
4.5
0.0045
Hypothalamus
TCTGGCACTG (
6
)
9.1
0.0091
Hypothalamus
CCAGCCTTCA (
15
)
3.6
0.0036
Hypothalamus
GGGTTCTGAC (
5
)
3.6
0.0036
Hypothalamus
AAATCTTTGC (
3
)
1.8
0.0018
Hypothalamus
CAGCCTCCTG
(
5
)
1.8
0.0018
Hypothalamus
TGCTGGTGCA
(
3
)
1.8
0.0018
E12.5 retina
GGGTTCTGAC (
5
)
13.1
0.0131
E12.5 retina
TCTGGCACTG (
6
)
5.6
0.0056
E12.5 retina
CAGCCTCCTG
(
5
)
1.9
0.0019
E12.5 retina
CCAGCCTTCA (
15
)
1.9
0.0019
E12.5 retina
GGAGAGAGAA
(
11
)
1.9
0.0019
E14.5 retina
GGGTTCTGAC (
5
)
16.4
0.0164
E14.5 retina
TCTGGCACTG (
6
)
16.4
0.0164
E14.5 retina
CCAGCCTTCA (
15
)
1.8
0.0018
E14.5 retina
CTGTCTAGAG
(
4
)
1.8
0.0018
E14.5 retina
TGCTGGTGCA
(
3
)
1.8
0.0018
E16.5 retina
GGGTTCTGAC (
5
)
19.9
0.0199
E16.5 retina
TCTGGCACTG (
6
)
9.1
0.0091
E16.5 retina
TGCTGGTGCA
(
3
)
3.6
0.0036
E16.5 retina
CAGCCTGCCC (
4
)
1.8
0.0018
E16.5 retina
CCAGCCTTCA (
15
)
1.8
0.0018
E18.5 retina
GGGTTCTGAC (
5
)
20
0.02
E18.5 retina
TCTGGCACTG (
6
)
9.1
0.0091
E18.5 retina
AAATCTTTGC (
3
)
1.8
0.0018
E18.5 retina
CAGCCTCCTG
(
5
)
1.8
0.0018
E18.5 retina
CCAGCCTTCA (
15
)
1.8
0.0018
P0.5 retina
GGGTTCTGAC (
5
)
7.9
0.0079
P0.5 retina
TCTGGCACTG (
6
)
5.9
0.0059
P0.5 retina
CCAGCCTTCA (
15
)
2
0.002
P0.5 retina
CTGTCTAGAG
(
4
)
2
0.002
P2.5 retina
GGGTTCTGAC (
5
)
22.9
0.0229
P2.5 retina
TCTGGCACTG (
6
)
15.8
0.0158
P2.5 retina
CCAGCCTTCA (
15
)
3.5
0.0035
P2.5 retina
CAGCCTGCCC (
4
)
1.8
0.0018
P2.5 retina
GGAGAGAGAA
(
11
)
1.8
0.0018
P2.5 retina
TGCTGGTGCA
(
3
)
1.8
0.0018
P4.5 retina
GGGTTCTGAC (
5
)
21.8
0.0218
P4.5 retina
CCAGCCTTCA (
15
)
9.9
0.0099
P4.5 retina
TCTGGCACTG (
6
)
9.9
0.0099
P4.5 retina
GGAGAGAGAA
(
11
)
2
0.002
P6.5 retina
GGGTTCTGAC (
5
)
33.3
0.0333
P6.5 retina
CCAGCCTTCA (
15
)
8.3
0.0083
P6.5 retina
AAATCTTTGC (
3
)
1.7
0.0017
P6.5 retina
CTGTCTAGAG
(
4
)
1.7
0.0017
P6.5 retina
TCTGGCACTG (
6
)
1.7
0.0017
P10.5 crx- retina
GGGTTCTGAC (
5
)
26
0.026
P10.5 crx- retina
TCTGGCACTG (
6
)
7.4
0.0074
P10.5 crx- retina
CCAGCCTTCA (
15
)
1.9
0.0019
P10.5 crx- retina
CTGTCTAGAG
(
4
)
1.9
0.0019
P10.5 crx- retina
TGCTGGTGCA
(
3
)
1.9
0.0019
P10.5 crx+ retina
GGGTTCTGAC (
5
)
53.8
0.0538
P10.5 crx+ retina
TCTGGCACTG (
6
)
13.5
0.0135
P10.5 crx+ retina
CCAGCCTTCA (
15
)
3.8
0.0038
P10.5 crx+ retina
TGCTGGTGCA
(
3
)
1.9
0.0019
Adult retinal
GGGTTCTGAC (
5
)
22.2
0.0222
Adult retinal
TCTGGCACTG (
6
)
7.4
0.0074
Adult retinal
CAGCCTGCCC (
4
)
3.7
0.0037
Adult retinal
CCAGCCTTCA (
15
)
1.9
0.0019
Adult retinal
TGCTGGTGCA
(
3
)
1.9
0.0019
ONL
GGGTTCTGAC (
5
)
38.3
0.0383
ONL
TGCTGGTGCA
(
3
)
1.9
0.0019
