Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.305108	0610039N19Rik	RIKEN cDNA 0610039N19 gene	6		67442
Human Homolog	FLJ20296[hypothetical protein FLJ20296]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 119 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC GCTCTGGCTG (8) 3.3 0.0033 P8 Cb GC AAACTGTAGG (3) 1.6 0.0016 P8 Cb GC GGGATGGAGG (6) 1.6 0.0016 P8 Cb GC GGGGATGGGC (2) 1.6 0.0016 P8 Cb GC TACAGAAGCA (2) 1.6 0.0016 P8 Cb GC TCATTATTGA (3) 1.6 0.0016 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma GCTCTGGCTG (8) 20.8 0.0208 Cb medulloblastoma TCATTATTGA (3) 4.6 0.0046 Cb medulloblastoma GGGGTGGAGG (9) 2.3 0.0023 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture TCATTATTGA (3) 9.1 0.0091 P8 GC+1d culture GCTCTGGCTG (8) 4.6 0.0046 P8 GC+1d culture CAATGGCTTC (2) 1.1 0.0011 P8 GC+1d culture GGGATGGAGG (6) 1.1 0.0011 P8 GC+1d culture GGGGATGGGC (2) 1.1 0.0011 P8 GC+1d culture TGTATGCAAA (2) 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture TCATTATTGA (3) 10.5 0.0105 P8 GC+SHH+1d culture GGGGATGGGC (2) 2.3 0.0023 P8 GC+SHH+1d culture GGTAGTTTGC 2.3 0.0023 P8 GC+SHH+1d culture GCTCTGGCTG (8) 1.2 0.0012 P8 GC+SHH+1d culture GGCCTTGAAA (4) 1.2 0.0012 P8 GC+SHH+1d culture GGGGTGGAGG (9) 1.2 0.0012 P8 GC+SHH+1d culture GTGGCACATA (5) 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 3T3 fibroblasts GGGATGGAGG (6) 3.5 0.0035 3T3 fibroblasts GGGGATGGGC (2) 3.5 0.0035 3T3 fibroblasts GTGGCACATA (5) 3.5 0.0035 3T3 fibroblasts TCTGTCCACT 3.5 0.0035 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex GCTCTGGCTG (8) 9.9 0.0099 E15 cortex GTGGCACATA (5) 4.9 0.0049 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex GCTCTGGCTG (8) 4.5 0.0045 P1 cortex TTTTCTTTGG (8) 4.5 0.0045 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus GCTCTGGCTG (8) 16.3 0.0163 Hypothalamus TCATTATTGA (3) 9.1 0.0091 Hypothalamus GCCTTTGAAT (3) 3.6 0.0036 Hypothalamus AAACTGTAGG (3) 1.8 0.0018 Hypothalamus TGTATGCAAA (2) 1.8 0.0018 Hypothalamus TTAAGTGAGT 1.8 0.0018 Hypothalamus TTTGGTATTG 1.8 0.0018 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina GCTCTGGCTG (8) 9.4 0.0094 E12.5 retina GGGATGGAGG (6) 1.9 0.0019 E12.5 retina TTAAGTGAGT 1.9 0.0019 E12.5 retina TTTTCTTTGG (8) 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina GCTCTGGCTG (8) 3.6 0.0036 E14.5 retina GTGGCACATA (5) 1.8 0.0018 E14.5 retina TCATTATTGA (3) 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina GCTCTGGCTG (8) 14.5 0.0145 E16.5 retina TCATTATTGA (3) 5.4 0.0054 E16.5 retina GTGGCACATA (5) 3.6 0.0036 E16.5 retina AAACTGTAGG (3) 1.8 0.0018 E16.5 retina GGCCTTGAAA (4) 1.8 0.0018 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina GCTCTGGCTG (8) 9.1 0.0091 E18.5 retina TTAAGTGAGT 1.8 0.0018 E18.5 retina TTTTCTTTGG (8) 1.8 0.0018 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina GCTCTGGCTG (8) 23.6 0.0236 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina GCTCTGGCTG (8) 15.8 0.0158 P2.5 retina TCATTATTGA (3) 14.1 0.0141 P2.5 retina AAACTGTAGG (3) 1.8 0.0018 P2.5 retina GGGATGGAGG (6) 1.8 0.0018 P2.5 retina TGTATGCAAA (2) 1.8 0.0018 P2.5 retina TTTTCTTTGG (8) 1.8 0.0018 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina GCTCTGGCTG (8) 11.9 0.0119 P4.5 retina AAACTGTAGG (3) 2 0.002 P4.5 retina GGGGATGGGC (2) 2 0.002 P4.5 retina TCATTATTGA (3) 2 0.002 P4.5 retina TTTGGTATTG 2 0.002 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina GCTCTGGCTG (8) 20 0.02 P6.5 retina TCATTATTGA (3) 5 0.005 P6.5 retina AAACTGTAGG (3) 1.7 0.0017 P6.5 retina CAATGGCTTC (2) 1.7 0.0017 P6.5 retina GGCCTTGAAA (4) 1.7 0.0017 P6.5 retina GGGATGGAGG (6) 1.7 0.0017 P6.5 retina GGGGTGGAGG (9) 1.7 0.0017 P6.5 retina GTGGCACATA (5) 1.7 0.0017 P6.5 retina TTTGGTATTG 1.7 0.0017 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina GCTCTGGCTG (8) 20.4 0.0204 P10.5 crx- retina AAACTGTAGG (3) 1.9 0.0019 P10.5 crx- retina GGGATGGAGG (6) 1.9 0.0019 P10.5 crx- retina TCATTATTGA (3) 1.9 0.0019 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina GCTCTGGCTG (8) 9.6 0.0096 P10.5 crx+ retina GGGGATGGGC (2) 3.8 0.0038 P10.5 crx+ retina GTGGCACATA (5) 3.8 0.0038 P10.5 crx+ retina CAATGGCTTC (2) 1.9 0.0019 P10.5 crx+ retina GGTAGTTTGC 1.9 0.0019 P10.5 crx+ retina TTAAGTGAGT 1.9 0.0019 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal TCATTATTGA (3) 7.4 0.0074 Adult retinal TCTGTCCACT 5.6 0.0056 Adult retinal GCCTTTGAAT (3) 3.7 0.0037 Adult retinal GCTCTGGCTG (8) 3.7 0.0037 Adult retinal AAACTGTAGG (3) 1.9 0.0019 Adult retinal GGGATGGAGG (6) 1.9 0.0019 Adult retinal GTGGCACATA (5) 1.9 0.0019 Adult retinal TACAGAAGCA (2) 1.9 0.0019 Adult retinal TTTTCTTTGG (8) 1.9 0.0019 ONL CCTTTAATCC (355) 84.3 0.0843 ONL GCTCTGGCTG (8) 5.7 0.0057 ONL AAACTGTAGG (3) 3.8 0.0038 ONL GTGGCACATA (5) 3.8 0.0038 ONL TCATTATTGA (3) 3.8 0.0038 ONL GGGATGGAGG (6) 1.9 0.0019 ONL GGGGTGGAGG (9) 1.9 0.0019 ONL TCTGTCCACT 1.9 0.0019