Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.305674	Irf6	interferon regulatory factor 6	1		54139
Gene Ontology	DNA binding | nucleus | regulation of transcription, DNA-dependent | transcription factor activity
Human Homolog	IRF6[interferon regulatory factor 6]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 29 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATCCTGTGA (2) GAGACAGTGA 11.4 0.0114 Cb medulloblastoma AAGTATAAAT (2) GAAGATCTAA 6.9 0.0069 P8 GC+1d culture AATCCTGTGA (2) TGCCAAACAG 2.2 0.0022 P8 GC+SHH+1d culture AAGTATAAAT (2) GAAGATCTAA GAGACAGTGA TGCCAAACAG 8.3 0.0083 P1 cortex GAAGATCTAA 9.1 0.0091 E12.5 retina AATCCTGTGA (2) 1.9 0.0019 E14.5 retina GAGACAGTGA 1.8 0.0018 E16.5 retina GAAGATCTAA 3.6 0.0036 E18.5 retina GAAGATCTAA 1.8 0.0018 P0.5 retina AATCCTGTGA (2) GAAGATCTAA 5.9 0.0059 P2.5 retina GAAGATCTAA TGCCAAACAG 5.3 0.0053 P6.5 retina AAGTATAAAT (2) TGCCAAACAG 3.4 0.0034 P10.5 crx- retina AAGTATAAAT (2) GAAGATCTAA 13 0.013 P10.5 crx+ retina AATCCTGTGA (2) GAAGATCTAA TGCCAAACAG 7.6 0.0076 Adult retinal AAGTATAAAT (2) AATCCTGTGA (2) 3.8 0.0038 ONL AAGTATAAAT (2) 1.9 0.0019