Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.306162	Lsm7	LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)	10		66094
Gene Ontology	cytoplasm | mRNA catabolism | protein heterodimerization activity
Human Homolog	LSM7[LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 114 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGAAAAAAAA (81) 27.7 0.0277 P8 Cb GC TGAGCATCTC (2) 17.9 0.0179 P8 Cb GC TGAGCAAAAA (2) 4.9 0.0049 P8 Cb GC TGAGCATCAA (2) 4.9 0.0049 P8 Cb GC GAGCCCTTCC (5) 1.6 0.0016 P8 Cb GC GTCCCATCCA (2) 1.6 0.0016 Cb medulloblastoma TGAAAAAAAA (81) 78.6 0.0786 Cb medulloblastoma TGAGCAAAAA (2) 16.2 0.0162 Cb medulloblastoma TGAGCATCTC (2) 9.2 0.0092 Cb medulloblastoma TGAGCATCAA (2) 6.9 0.0069 Cb medulloblastoma GAGCCCTTCC (5) 2.3 0.0023 P8 GC+1d culture TGAAAAAAAA (81) 26.3 0.0263 P8 GC+1d culture TGAGCAAAAA (2) 6.8 0.0068 P8 GC+1d culture TGAGCATCAA (2) 6.8 0.0068 P8 GC+1d culture GAGCCCTTCC (5) 2.3 0.0023 P8 GC+1d culture TGAGCATCTC (2) 2.3 0.0023 P8 GC+1d culture TGAGCAAAGA (2) 1.1 0.0011 P8 GC+SHH+1d culture TGAAAAAAAA (81) 57.4 0.0574 P8 GC+SHH+1d culture TGAGCATCTC (2) 15.2 0.0152 P8 GC+SHH+1d culture TGAGCAAAAA (2) 10.5 0.0105 P8 GC+SHH+1d culture TGAGCATCAA (2) 4.7 0.0047 P8 GC+SHH+1d culture GTCCCATCCA (2) 1.2 0.0012 3T3 fibroblasts TGAGCATCTC (2) 10.5 0.0105 3T3 fibroblasts TGAAAAAAAA (81) 7 0.007 3T3 fibroblasts TGAGCAAAAA (2) 3.5 0.0035 E15 cortex TGAAAAAAAA (81) 29.7 0.0297 E15 cortex TGAGCAAAAA (2) 4.9 0.0049 E15 cortex TGAGCATCAA (2) 4.9 0.0049 E15 cortex TGAGCATCTC (2) 4.9 0.0049 P1 cortex TGAAAAAAAA (81) 4.5 0.0045 P1 cortex TGAGCAAAAA (2) 4.5 0.0045 P1 cortex TGAGCATCTC (2) 4.5 0.0045 Hypothalamus TGAAAAAAAA (81) 36.2 0.0362 Hypothalamus TGAGCATCAA (2) 9.1 0.0091 Hypothalamus GAGGCCATCC (5) 7.2 0.0072 Hypothalamus TGAGCAAAAA (2) 5.4 0.0054 Hypothalamus AGGAGGTGAG (3) 3.6 0.0036 Hypothalamus TGAGCATCTC (2) 1.8 0.0018 E12.5 retina TGAAAAAAAA (81) 31.9 0.0319 E12.5 retina TGAGCAAAAA (2) 9.4 0.0094 E12.5 retina TGAGCATCTC (2) 9.4 0.0094 E12.5 retina GAGCCCTTCC (5) 7.5 0.0075 E12.5 retina TGAGCATCAA (2) 7.5 0.0075 E12.5 retina GAGGCCATCC (5) 1.9 0.0019 E14.5 retina TGAAAAAAAA (81) 49.2 0.0492 E14.5 retina TGAGCATCTC (2) 14.6 0.0146 E14.5 retina TGAGCATCAA (2) 7.3 0.0073 E14.5 retina AGGAGGTGAG (3) 3.6 0.0036 E14.5 retina GAGCCCTTCC (5) 3.6 0.0036 E14.5 retina TGAGCAAAAA (2) 3.6 0.0036 E14.5 retina GAGGCCATCC (5) 1.8 0.0018 E14.5 retina GTCCCATCCA (2) 1.8 0.0018 E16.5 retina TGAAAAAAAA (81) 16.3 0.0163 E16.5 retina TGAGCATCTC (2) 14.5 0.0145 E16.5 retina TGAGCAAAAA (2) 9.1 0.0091 E16.5 retina TGAGCATCAA (2) 9.1 0.0091 E16.5 retina GAGCCCTTCC (5) 5.4 0.0054 E16.5 retina AGGAGGTGAG (3) 3.6 0.0036 E18.5 retina TGAAAAAAAA (81) 74.6 0.0746 E18.5 retina TGAGCAAAAA (2) 21.8 0.0218 E18.5 retina TGAGCATCTC (2) 12.7 0.0127 E18.5 retina TGAGCATCAA (2) 10.9 0.0109 E18.5 retina GAGCCCTTCC (5) 3.6 0.0036 P0.5 retina TGAAAAAAAA (81) 15.7 0.0157 P0.5 retina TGAGCATCTC (2) 15.7 0.0157 P0.5 retina TGAGCATCAA (2) 7.9 0.0079 P0.5 retina GAGCCCTTCC (5) 2 0.002 P0.5 retina TGAGCAAAAA (2) 2 0.002 P2.5 retina TGAAAAAAAA (81) 42.2 0.0422 P2.5 retina TGAGCATCTC (2) 21.1 0.0211 P2.5 retina GAGCCCTTCC (5) 12.3 0.0123 P2.5 retina TGAGCATCAA (2) 7 0.007 P2.5 retina TGAGCAAAAA (2) 5.3 0.0053 P2.5 retina GAGGCCATCC (5) 1.8 0.0018 P2.5 retina GTCCCATCCA (2) 1.8 0.0018 P2.5 retina TGAGCAAAGA (2) 1.8 0.0018 P4.5 retina TGAAAAAAAA (81) 43.6 0.0436 P4.5 retina TGAGCAAAAA (2) 7.9 0.0079 P4.5 retina TGAGCATCTC (2) 7.9 0.0079 P4.5 retina TGAGCAAAGA (2) 4 0.004 P4.5 retina TGAGCATCAA (2) 4 0.004 P4.5 retina GAGCCCTTCC (5) 2 0.002 P6.5 retina TGAAAAAAAA (81) 33.3 0.0333 P6.5 retina TGAGCATCTC (2) 11.7 0.0117 P6.5 retina TGAGCATCAA (2) 6.7 0.0067 P6.5 retina GAGCCCTTCC (5) 5 0.005 P6.5 retina TGAGCAAAAA (2) 3.3 0.0033 P6.5 retina TGAGCAAAGA (2) 3.3 0.0033 P6.5 retina GAGGCCATCC (5) 1.7 0.0017 P10.5 crx- retina TGAAAAAAAA (81) 9.3 0.0093 P10.5 crx- retina TGAGCATCAA (2) 5.6 0.0056 P10.5 crx- retina TGAGCATCTC (2) 5.6 0.0056 P10.5 crx- retina AGGAGGTGAG (3) 1.9 0.0019 P10.5 crx- retina GAGCCCTTCC (5) 1.9 0.0019 P10.5 crx- retina GTCCCATCCA (2) 1.9 0.0019 P10.5 crx- retina TGAGCAAAAA (2) 1.9 0.0019 P10.5 crx+ retina TGAAAAAAAA (81) 19.2 0.0192 P10.5 crx+ retina TGAGCATCTC (2) 7.7 0.0077 P10.5 crx+ retina TGAGCATCAA (2) 5.8 0.0058 P10.5 crx+ retina TGAGCAAAAA (2) 3.8 0.0038 P10.5 crx+ retina GTCCCATCCA (2) 1.9 0.0019 P10.5 crx+ retina TGAGCAAAGA (2) 1.9 0.0019 Adult retinal TGAAAAAAAA (81) 13 0.013 Adult retinal TGAGCAAAAA (2) 3.7 0.0037 Adult retinal GAGCCCTTCC (5) 1.9 0.0019 Adult retinal TGAGCATCAA (2) 1.9 0.0019 Adult retinal TGAGCATCTC (2) 1.9 0.0019 ONL TGAAAAAAAA (81) 19.2 0.0192 ONL TGAGCATCAA (2) 7.7 0.0077 ONL TGAGCATCTC (2) 5.7 0.0057 ONL TGAGCAAAGA (2) 3.8 0.0038 ONL GAGCCCTTCC (5) 1.9 0.0019 ONL GAGGCCATCC (5) 1.9 0.0019 ONL TGAGCAAAAA (2) 1.9 0.0019