| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ACCGGGCTGG (5)
| 3.3 | 0.0033 |
| Cb medulloblastoma | AACTATTAAA (2) ACCGGGCTGG (5)
| 11.5 | 0.0115 |
| P8 GC+1d culture | AACTATTAAA (2) ACCGGGCTGG (5) TGGCCCTGTG (4)
| 5.6 | 0.0056 |
| P8 GC+SHH+1d culture | ACCGGGCTGG (5)
| 4.7 | 0.0047 |
| 3T3 fibroblasts | ACCGGGCTGG (5)
| 17.5 | 0.0175 |
| E15 cortex | ACCGGGCTGG (5)
| 9.9 | 0.0099 |
| P1 cortex | AACTATTAAA (2) ACCGGGCTGG (5) TTTTCCTGTC (2)
| 22.6 | 0.0226 |
| Hypothalamus | AACTATTAAA (2)
| 30.8 | 0.0308 |
| E12.5 retina | AACTATTAAA (2) ACCGGGCTGG (5)
| 3.8 | 0.0038 |
| E14.5 retina | AACTATTAAA (2) ACCGGGCTGG (5)
| 3.6 | 0.0036 |
| E16.5 retina | AACTATTAAA (2) TGGCCCTGTG (4)
| 5.4 | 0.0054 |
| E18.5 retina | AACTATTAAA (2)
| 5.5 | 0.0055 |
| P0.5 retina | ACCGGGCTGG (5) TGGCCCTGTG (4)
| 5.9 | 0.0059 |
| P2.5 retina | AACTATTAAA (2) TTTTCCTGTC (2)
| 7.1 | 0.0071 |
| P4.5 retina | AACTATTAAA (2)
| 5.9 | 0.0059 |
| P6.5 retina | AACTATTAAA (2)
| 8.3 | 0.0083 |
| P10.5 crx- retina | AACTATTAAA (2) ACCGGGCTGG (5) TGGCCCTGTG (4)
| 7.5 | 0.0075 |
| P10.5 crx+ retina | AACTATTAAA (2) ACCGGGCTGG (5) TTTCCTGTCA (3)
| 9.6 | 0.0096 |
| Adult retinal | AACTATTAAA (2) ACCGGGCTGG (5)
| 9.3 | 0.0093 |
| ONL | TTTCCTGTCA (3) TTTTCCTGTC (2)
| 5.7 | 0.0057 |