Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.3065
Xrn2
5'-3' exoribonuclease 2
2
24128
Mm.3065
AA409570
expressed sequence AA409570
2
98787
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 83 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TACTGCTGAT (
3
)
45.7
0.0457
P8 Cb GC
AATTCCCTTT (
4
)
11.4
0.0114
P8 Cb GC
TTAGCAGTTG
(
2
)
6.5
0.0065
P8 Cb GC
CTGCTTTCCA
(
6
)
1.6
0.0016
Cb medulloblastoma
TACTGCTGAT (
3
)
41.6
0.0416
Cb medulloblastoma
AATTCCCTTT (
4
)
6.9
0.0069
Cb medulloblastoma
GGGCTCTTTT (
5
)
2.3
0.0023
P8 GC+1d culture
TACTGCTGAT (
3
)
71.9
0.0719
P8 GC+1d culture
AATTCCCTTT (
4
)
6.8
0.0068
P8 GC+1d culture
CTGCTTTCCA
(
6
)
5.7
0.0057
P8 GC+1d culture
GAACCGGATG
(
2
)
2.3
0.0023
P8 GC+1d culture
AACCACGCAA (
4
)
1.1
0.0011
P8 GC+1d culture
TCCTCTGAAT (
5
)
1.1
0.0011
P8 GC+SHH+1d culture
TACTGCTGAT (
3
)
72.6
0.0726
P8 GC+SHH+1d culture
AATTCCCTTT (
4
)
4.7
0.0047
P8 GC+SHH+1d culture
GAACCGGATG
(
2
)
3.5
0.0035
P8 GC+SHH+1d culture
CTGCTTTCCA
(
6
)
2.3
0.0023
P8 GC+SHH+1d culture
AACCACGCAA (
4
)
1.2
0.0012
3T3 fibroblasts
TTAGCAGTTG
(
2
)
7
0.007
3T3 fibroblasts
AATTCCCTTT (
4
)
3.5
0.0035
E15 cortex
CTGCTTTCCA
(
6
)
14.8
0.0148
E15 cortex
TACTGCTGAT (
3
)
9.9
0.0099
E15 cortex
TCCTCTGAAT (
5
)
4.9
0.0049
P1 cortex
TACTGCTGAT (
3
)
9.1
0.0091
P1 cortex
AACCACGCAA (
4
)
4.5
0.0045
P1 cortex
CTGCTTTCCA
(
6
)
4.5
0.0045
P1 cortex
GGAGTCCCGG
(
4
)
4.5
0.0045
Hypothalamus
TACTGCTGAT (
3
)
23.5
0.0235
Hypothalamus
AACCACGCAA (
4
)
1.8
0.0018
Hypothalamus
AATTCCCTTT (
4
)
1.8
0.0018
Hypothalamus
CTGCTTTTCA (
7
)
1.8
0.0018
Hypothalamus
TCCTCTGAAT (
5
)
1.8
0.0018
E12.5 retina
TACTGCTGAT (
3
)
30
0.03
E12.5 retina
AATTCCCTTT (
4
)
7.5
0.0075
E12.5 retina
CTGCTTTCCA
(
6
)
5.6
0.0056
E12.5 retina
AACCACGCAA (
4
)
1.9
0.0019
E14.5 retina
AATTCCCTTT (
4
)
21.9
0.0219
E14.5 retina
TACTGCTGAT (
3
)
21.9
0.0219
E14.5 retina
CTGCTTTCCA
(
6
)
3.6
0.0036
E14.5 retina
CTGCTTTTCA (
7
)
1.8
0.0018
E14.5 retina
TTAGCAGTTG
(
2
)
1.8
0.0018
E16.5 retina
TACTGCTGAT (
3
)
19.9
0.0199
E16.5 retina
AATTCCCTTT (
4
)
18.1
0.0181
E16.5 retina
CTGCTTTCCA
(
6
)
1.8
0.0018
E16.5 retina
CTGCTTTTCA (
7
)
1.8
0.0018
E16.5 retina
GAACCGGATG
(
2
)
1.8
0.0018
E16.5 retina
GGAGTCCCGG
(
4
)
1.8
0.0018
E18.5 retina
TACTGCTGAT (
3
)
45.5
0.0455
E18.5 retina
AATTCCCTTT (
4
)
14.6
0.0146
P0.5 retina
TACTGCTGAT (
3
)
23.6
0.0236
P0.5 retina
CTGCTTTCCA
(
6
)
7.9
0.0079
P0.5 retina
AACCACGCAA (
4
)
2
0.002
P0.5 retina
AATTCCCTTT (
4
)
2
0.002
P0.5 retina
GGGCTCTTTT (
5
)
2
0.002
P2.5 retina
TACTGCTGAT (
3
)
24.6
0.0246
P2.5 retina
AATTCCCTTT (
4
)
10.6
0.0106
P2.5 retina
CTGCTTTCCA
(
6
)
5.3
0.0053
P2.5 retina
TCCTCTGAAT (
5
)
1.8
0.0018
P2.5 retina
TTAGCAGTTG
(
2
)
1.8
0.0018
P4.5 retina
TACTGCTGAT (
3
)
51.5
0.0515
P4.5 retina
CTGCTTTCCA
(
6
)
9.9
0.0099
P4.5 retina
AATTCCCTTT (
4
)
4
0.004
P4.5 retina
GGAGTCCCGG
(
4
)
2
0.002
P4.5 retina
TCCTCTGAAT (
5
)
2
0.002
P6.5 retina
TACTGCTGAT (
3
)
23.3
0.0233
P6.5 retina
AATTCCCTTT (
4
)
6.7
0.0067
P6.5 retina
CTGCTTTCCA
(
6
)
3.3
0.0033
P10.5 crx- retina
TACTGCTGAT (
3
)
29.7
0.0297
P10.5 crx- retina
AATTCCCTTT (
4
)
9.3
0.0093
P10.5 crx- retina
CTGCTTTCCA
(
6
)
3.7
0.0037
P10.5 crx- retina
AACCACGCAA (
4
)
1.9
0.0019
P10.5 crx- retina
GGGCTCTTTT (
5
)
1.9
0.0019
P10.5 crx+ retina
TACTGCTGAT (
3
)
17.3
0.0173
P10.5 crx+ retina
AACCACGCAA (
4
)
5.8
0.0058
P10.5 crx+ retina
AATTCCCTTT (
4
)
3.8
0.0038
P10.5 crx+ retina
CTGCTTTCCA
(
6
)
3.8
0.0038
Adult retinal
TACTGCTGAT (
3
)
13
0.013
Adult retinal
AATTCCCTTT (
4
)
1.9
0.0019
Adult retinal
CTGCTTTCCA
(
6
)
1.9
0.0019
ONL
TACTGCTGAT (
3
)
11.5
0.0115
ONL
AATTCCCTTT (
4
)
3.8
0.0038
ONL
AACCACGCAA (
4
)
1.9
0.0019
ONL
GGAGTCCCGG
(
4
)
1.9
0.0019
