Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.30660 AW047464expressed sequence AW047464 4    100384 
 Mm.30660 Prpf4PRP4 pre-mRNA processing factor 4 homolog (yeast) 4    70052 
 Gene Ontology nuclear mRNA splicing, via spliceosome | ribonucleoprotein complex | U4/U6 x U5 tri-snRNP complex | viral nucleocapsid
 Human Homolog PRPF4[PRP4 pre-mRNA processing factor 4 homolog (yeast)]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 80 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCCCTTTAATCC (355)52.20.0522
P8 Cb GCTCAAAAAAAA (60)17.90.0179
P8 Cb GCTCAAAGGAAC (6)6.50.0065
Cb medulloblastomaTCAAAAAAAA (60)99.40.0994
Cb medulloblastomaCCTTTAATCC (355)41.60.0416
Cb medulloblastomaTCAAAGGAAA (4)2.30.0023
P8 GC+1d cultureCCTTTAATCC (355)320.032
P8 GC+1d cultureTCAAAAAAAA (60)17.10.0171
P8 GC+1d cultureTCAAAGGAAC (6)14.80.0148
P8 GC+1d cultureTTTCCTGCCA (6)2.30.0023
P8 GC+SHH+1d cultureTCAAAAAAAA (60)51.50.0515
P8 GC+SHH+1d cultureCCTTTAATCC (355)25.80.0258
P8 GC+SHH+1d cultureTCAAAGGAAC (6)11.70.0117
P8 GC+SHH+1d cultureTGTTGGATTG (4)2.30.0023
P8 GC+SHH+1d cultureGCCTCCTGAC (4)1.20.0012
P8 GC+SHH+1d cultureTCAAAGGAAA (4)1.20.0012
P8 GC+SHH+1d cultureTTTCCTGCCA (6)1.20.0012
3T3 fibroblastsCCTTTAATCC (355)70.10.0701
3T3 fibroblastsTCAAAAAAAA (60)70.007
3T3 fibroblastsGCCTCCTGAC (4)3.50.0035
E15 cortexCCTTTAATCC (355)54.40.0544
E15 cortexTCAAAAAAAA (60)14.80.0148
P1 cortexCCTTTAATCC (355)154.50.1545
P1 cortexTCAAAAAAAA (60)22.70.0227
HypothalamusTCAAAAAAAA (60)39.80.0398
HypothalamusCCTTTAATCC (355)19.90.0199
HypothalamusTCAAAGGAAC (6)3.60.0036
E12.5 retinaCCTTTAATCC (355)75.10.0751
E12.5 retinaTCAAAAAAAA (60)18.80.0188
E12.5 retinaTCAAAGGAAC (6)3.80.0038
E12.5 retinaTGTTGGATTG (4)3.80.0038
E12.5 retinaGCCTCCTGAC (4)1.90.0019
E12.5 retinaTTTCCTGCCA (6)1.90.0019
E14.5 retinaCCTTTAATCC (355)120.30.1203
E14.5 retinaTCAAAAAAAA (60)41.90.0419
E14.5 retinaATGTCTGTGT (10)1.80.0018
E14.5 retinaTTTCCTGCCA (6)1.80.0018
E16.5 retinaCCTTTAATCC (355)68.80.0688
E16.5 retinaTCAAAAAAAA (60)18.10.0181
E16.5 retinaTCAAAGGAAC (6)16.30.0163
E16.5 retinaATGTCTGTGT (10)3.60.0036
E16.5 retinaTTTCCTGCCA (6)1.80.0018
E18.5 retinaTCAAAAAAAA (60)49.10.0491
E18.5 retinaCCTTTAATCC (355)23.60.0236
P0.5 retinaCCTTTAATCC (355)72.60.0726
P0.5 retinaTCAAAAAAAA (60)31.40.0314
P0.5 retinaTCAAAGGAAC (6)5.90.0059
P0.5 retinaTTTCCTGCCA (6)3.90.0039
P0.5 retinaGCCTCCTGAC (4)20.002
P2.5 retinaCCTTTAATCC (355)70.40.0704
P2.5 retinaTCAAAAAAAA (60)35.20.0352
P2.5 retinaTCAAAGGAAC (6)8.80.0088
P2.5 retinaGGGGACTTCT (3)3.50.0035
P2.5 retinaTTTCCTGCCA (6)3.50.0035
P4.5 retinaCCTTTAATCC (355)43.60.0436
P4.5 retinaTCAAAAAAAA (60)37.60.0376
P4.5 retinaTCAAAGGAAC (6)9.90.0099
P4.5 retinaTGTTGGATTG (4)20.002
P6.5 retinaCCTTTAATCC (355)700.07
P6.5 retinaTCAAAAAAAA (60)31.70.0317
P6.5 retinaTCAAAGGAAC (6)100.01
P6.5 retinaGGGGACTTCT (3)50.005
P6.5 retinaGCCTCCTGAC (4)1.70.0017
P6.5 retinaTCAAAGGAAA (4)1.70.0017
P10.5 crx- retinaCCTTTAATCC (355)63.20.0632
P10.5 crx- retinaTCAAAAAAAA (60)14.90.0149
P10.5 crx- retinaTCAAAGGAAC (6)5.60.0056
P10.5 crx- retinaTTTCCTGCCA (6)1.90.0019
P10.5 crx+ retinaCCTTTAATCC (355)38.40.0384
P10.5 crx+ retinaTCAAAAAAAA (60)17.30.0173
P10.5 crx+ retinaTCAAAGGAAC (6)3.80.0038
P10.5 crx+ retinaGGGGACTTCT (3)1.90.0019
Adult retinalCCTTTAATCC (355)129.60.1296
Adult retinalTCAAAAAAAA (60)20.40.0204
Adult retinalTCAAAGGAAA (4)1.90.0019
Adult retinalTCAAAGGAAC (6)1.90.0019
Adult retinalTTTCCTGCCA (6)1.90.0019
ONLCCTTTAATCC (355)84.30.0843
ONLTCAAAAAAAA (60)15.30.0153
ONLTCAAAGGAAA (4)1.90.0019