Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.306805
3100004P22Rik
RIKEN cDNA 3100004P22 gene
7
68035
Human Homolog
MGC10433[hypothetical protein MGC10433]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 64 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTCCTGAGGC
(
2
)
6.5
0.0065
P8 Cb GC
TGGAAGGACC
(
2
)
4.9
0.0049
P8 Cb GC
AGGCCAGGAG (
4
)
1.6
0.0016
Cb medulloblastoma
TGGAAGGACC
(
2
)
4.6
0.0046
Cb medulloblastoma
GCCCTGTCTG (
3
)
2.3
0.0023
P8 GC+1d culture
TGGAAGGACC
(
2
)
19.4
0.0194
P8 GC+1d culture
TTCCTGAGGC
(
2
)
5.7
0.0057
P8 GC+1d culture
GCCCTGTCTG (
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TTCCTGAGGC
(
2
)
10.5
0.0105
P8 GC+SHH+1d culture
TGGAAGGACC
(
2
)
7
0.007
P8 GC+SHH+1d culture
GCGCGCACAT
2.3
0.0023
P8 GC+SHH+1d culture
AGGCCAGGAG (
4
)
1.2
0.0012
P8 GC+SHH+1d culture
GCCCTAGAGG
1.2
0.0012
P8 GC+SHH+1d culture
GCCCTGTCTG (
3
)
1.2
0.0012
3T3 fibroblasts
TGGAAGGACC
(
2
)
14
0.014
3T3 fibroblasts
TTCCTGAGGC
(
2
)
7
0.007
3T3 fibroblasts
GTGGGAGGCC
(
2
)
3.5
0.0035
E15 cortex
TGGAAGGACC
(
2
)
24.7
0.0247
E15 cortex
TTCCTGAGGC
(
2
)
9.9
0.0099
P1 cortex
TGGAAGGACC
(
2
)
4.5
0.0045
P1 cortex
TTCCTGAGGC
(
2
)
4.5
0.0045
Hypothalamus
TTCCTGAGGC
(
2
)
1.8
0.0018
E12.5 retina
TTCCTGAGGC
(
2
)
7.5
0.0075
E12.5 retina
TGGAAGGACC
(
2
)
5.6
0.0056
E12.5 retina
AGGCCAGGAG (
4
)
3.8
0.0038
E12.5 retina
CTTTTGCGAA
1.9
0.0019
E14.5 retina
AGGCCAGGAG (
4
)
1.8
0.0018
E14.5 retina
CCCCTTGCCC (
3
)
1.8
0.0018
E14.5 retina
CTTTTGCGAA
1.8
0.0018
E14.5 retina
TGGAAGGACC
(
2
)
1.8
0.0018
E16.5 retina
TTCCTGAGGC
(
2
)
14.5
0.0145
E16.5 retina
TGGAAGGACC
(
2
)
7.2
0.0072
E16.5 retina
CCCCTTGCCC (
3
)
3.6
0.0036
E16.5 retina
CTTTTGCGAA
1.8
0.0018
E16.5 retina
GCGCGCACAT
1.8
0.0018
E16.5 retina
GTGGGAGGCC
(
2
)
1.8
0.0018
E18.5 retina
TTCCTGAGGC
(
2
)
7.3
0.0073
E18.5 retina
TGGAAGGACC
(
2
)
3.6
0.0036
P0.5 retina
TGGAAGGACC
(
2
)
9.8
0.0098
P0.5 retina
TTCCTGAGGC
(
2
)
7.9
0.0079
P0.5 retina
CCCCTTGCCC (
3
)
5.9
0.0059
P0.5 retina
CTTTTGCGAA
5.9
0.0059
P0.5 retina
GCCCTAGAGG
2
0.002
P2.5 retina
TGGAAGGACC
(
2
)
12.3
0.0123
P2.5 retina
TTCCTGAGGC
(
2
)
7
0.007
P2.5 retina
GCGCGCACAT
1.8
0.0018
P4.5 retina
TGGAAGGACC
(
2
)
4
0.004
P4.5 retina
AGGCCAGGAG (
4
)
2
0.002
P4.5 retina
GCCCTAGAGG
2
0.002
P4.5 retina
TTCCTGAGGC
(
2
)
2
0.002
P6.5 retina
TTCCTGAGGC
(
2
)
10
0.01
P6.5 retina
TGGAAGGACC
(
2
)
8.3
0.0083
P6.5 retina
CCCCTTGCCC (
3
)
1.7
0.0017
P6.5 retina
GTGGGAGGCC
(
2
)
1.7
0.0017
P10.5 crx- retina
TTCCTGAGGC
(
2
)
11.1
0.0111
P10.5 crx- retina
TGGAAGGACC
(
2
)
5.6
0.0056
P10.5 crx- retina
AGGCCAGGAG (
4
)
1.9
0.0019
P10.5 crx+ retina
TGGAAGGACC
(
2
)
3.8
0.0038
P10.5 crx+ retina
TTCCTGAGGC
(
2
)
3.8
0.0038
Adult retinal
TGGAAGGACC
(
2
)
11.1
0.0111
Adult retinal
TTCCTGAGGC
(
2
)
11.1
0.0111
ONL
TGGAAGGACC
(
2
)
9.6
0.0096
ONL
AGGCCAGGAG (
4
)
3.8
0.0038
ONL
TTCCTGAGGC
(
2
)
3.8
0.0038
