Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.307488	Cdc42ep1	CDC42 effector protein (Rho GTPase binding) 1	15		104445
Gene Ontology	cytoplasm | protein binding | Rho protein signal transduction
Human Homolog	CDC42EP1[CDC42 effector protein (Rho GTPase binding) 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 40 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  Cb medulloblastoma CAAAGGTGCT (2) 4.6 0.0046 Cb medulloblastoma GTCCTGAGAG (3) 4.6 0.0046 Cb medulloblastoma CGTGGAAAAT (2) 2.3 0.0023 Cb medulloblastoma GGTCCCCGCT (4) 2.3 0.0023 Cb medulloblastoma TTAAAAAAGG (2) 2.3 0.0023 P8 GC+1d culture GTCCTGAGAG (3) 6.8 0.0068 P8 GC+1d culture TTAAAAAAGG (2) 1.1 0.0011 P8 GC+SHH+1d culture GTCCTGAGAG (3) 2.3 0.0023 P8 GC+SHH+1d culture CGTGGAAAAT (2) 1.2 0.0012 3T3 fibroblasts GTCCTGAGAG (3) 14 0.014 3T3 fibroblasts GGTCCCCGCT (4) 3.5 0.0035 P1 cortex CAAAGGTGCT (2) 13.6 0.0136 Hypothalamus CAAAGGTGCT (2) 7.2 0.0072 Hypothalamus GTCCTGAGAG (3) 7.2 0.0072 Hypothalamus CGTGGAAAAT (2) 5.4 0.0054 E12.5 retina CAAAGGTGCT (2) 1.9 0.0019 E12.5 retina GTCCTGAGAG (3) 1.9 0.0019 E16.5 retina GTCCTGAGAG (3) 1.8 0.0018 E18.5 retina GTCCTGAGAG (3) 3.6 0.0036 P0.5 retina GTCCTGAGAG (3) 2 0.002 P2.5 retina CGTGGAAAAT (2) 1.8 0.0018 P2.5 retina GTCCTGAGAG (3) 1.8 0.0018 P4.5 retina GTCCTGAGAG (3) 2 0.002 P4.5 retina TGTGGAAAAT (4) 2 0.002 P6.5 retina CGTGGAAAAT (2) 3.3 0.0033 P6.5 retina GGTCCCCGCT (4) 1.7 0.0017 P6.5 retina GTCCTGAGAG (3) 1.7 0.0017 P10.5 crx- retina GTCCTGAGAG (3) 3.7 0.0037 P10.5 crx- retina CAAAGGTGCT (2) 1.9 0.0019 P10.5 crx- retina GGTCCCCGCT (4) 1.9 0.0019 P10.5 crx- retina TGTGGAAAAT (4) 1.9 0.0019 P10.5 crx+ retina GTCCTGAGAG (3) 5.8 0.0058 P10.5 crx+ retina GGTCCCCGCT (4) 3.8 0.0038 P10.5 crx+ retina TGTGGAAAAT (4) 1.9 0.0019 Adult retinal GGTCCCCGCT (4) 7.4 0.0074 Adult retinal GTCCTGAGAG (3) 3.7 0.0037 Adult retinal CGTGGAAAAT (2) 1.9 0.0019 ONL GTCCTGAGAG (3) 3.8 0.0038 ONL CAAAGGTGCT (2) 1.9 0.0019 ONL TTAAAAAAGG (2) 1.9 0.0019