Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3077	Nr1i3	nuclear receptor subfamily 1, group I, member 3	1	1 92.6 cM	12355
Gene Ontology	cytosol | DNA binding | ligand-dependent nuclear receptor activity | nucleus | protein binding | receptor activity | regulation of transcription, DNA-dependent | steroid hormone receptor activity | transcription factor activity
Human Homolog	NR1I3[nuclear receptor subfamily 1, group I, member 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 25 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGCTACGACT (2) 1.6 0.0016 Cb medulloblastoma AGCTACGACT (2) 2.3 0.0023 Cb medulloblastoma GAAAGAGGGA (5) 2.3 0.0023 P8 GC+1d culture GAAAGAGGGA (5) 3.4 0.0034 P8 GC+SHH+1d culture AGCTACGACT (2) 1.2 0.0012 P8 GC+SHH+1d culture GAAAGAGGGA (5) 1.2 0.0012 E15 cortex GAAAGAGGGA (5) 4.9 0.0049 Hypothalamus GAAAGAGGGA (5) 7.2 0.0072 E12.5 retina GAAAGAGGGA (5) 7.5 0.0075 E14.5 retina GAAAGAGGGA (5) 1.8 0.0018 E16.5 retina GAAAGAGGGA (5) 5.4 0.0054 E16.5 retina AGCTACGACT (2) 1.8 0.0018 E18.5 retina GAAAGAGGGA (5) 7.3 0.0073 P0.5 retina GAAAGAGGGA (5) 2 0.002 P2.5 retina GAAAGAGGGA (5) 7 0.007 P4.5 retina GAAAGAGGGA (5) 7.9 0.0079 P6.5 retina GAAAGAGGGA (5) 3.3 0.0033 P6.5 retina GCAGAGGTCT 3.3 0.0033 P10.5 crx- retina AGCTACGACT (2) 1.9 0.0019 P10.5 crx- retina GAAAGAGGGA (5) 1.9 0.0019 P10.5 crx+ retina GAAAGAGGGA (5) 5.8 0.0058 P10.5 crx+ retina AGCTACGACT (2) 1.9 0.0019 Adult retinal GAAAGAGGGA (5) 1.9 0.0019 ONL GAAAGAGGGA (5) 3.8 0.0038 ONL GCAGAGGTCT 1.9 0.0019