Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.307846	Rpl22	ribosomal protein L22	4		19934
Gene Ontology	cytosolic ribosome (sensu Eukarya) | heparin binding | intracellular | protein biosynthesis | ribosome | ribosome biogenesis | RNA binding | structural constituent of ribosome
Human Homolog	RPL22[ribosomal protein L22]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 133 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GATGCTGCCA 26.1 0.0261 P8 Cb GC TGTCAGCCAC 3.3 0.0033 P8 Cb GC CAGAGGTCAG 1.6 0.0016 P8 Cb GC GACGCTGCCA 1.6 0.0016 P8 Cb GC GCTAAAAAAA (2) 1.6 0.0016 P8 Cb GC GCTACTGTCA 1.6 0.0016 P8 Cb GC GTCCGGCGAT 1.6 0.0016 P8 Cb GC TAATAAAATG 1.6 0.0016 P8 Cb GC TTCAAGTTTT (2) 1.6 0.0016 Cb medulloblastoma GCTAAAAAAA (2) 9.2 0.0092 Cb medulloblastoma GCTACTGTCA 6.9 0.0069 Cb medulloblastoma TTCAAGTTTT (2) 4.6 0.0046 Cb medulloblastoma GATGCTGCCA 2.3 0.0023 Cb medulloblastoma TGGTGGTCTT (2) 2.3 0.0023 P8 GC+1d culture GATGCTGCCA 32 0.032 P8 GC+1d culture TAATAAAATG 3.4 0.0034 P8 GC+1d culture GACGCTGCCA 1.1 0.0011 P8 GC+1d culture GCTAAAAAAA (2) 1.1 0.0011 P8 GC+1d culture TGGTGGTCTT (2) 1.1 0.0011 P8 GC+1d culture TTCAAGTTTT (2) 1.1 0.0011 P8 GC+SHH+1d culture GATGCTGCCA 19.9 0.0199 P8 GC+SHH+1d culture GCGGCAGAGG 7 0.007 P8 GC+SHH+1d culture TAATAAAATG 5.9 0.0059 P8 GC+SHH+1d culture ATTCCATCTT (2) 4.7 0.0047 P8 GC+SHH+1d culture GCTACTGTCA 4.7 0.0047 P8 GC+SHH+1d culture GCTAAAAAAA (2) 2.3 0.0023 P8 GC+SHH+1d culture TGTCAGCCAC 2.3 0.0023 P8 GC+SHH+1d culture GATGCTCCCA 1.2 0.0012 P8 GC+SHH+1d culture GCGCCTGTGA 1.2 0.0012 P8 GC+SHH+1d culture TGCTGGCTCT 1.2 0.0012 P8 GC+SHH+1d culture TTCAAGTTTT (2) 1.2 0.0012 3T3 fibroblasts GATGCTGCCA 17.5 0.0175 3T3 fibroblasts GCGCCTGTGA 3.5 0.0035 3T3 fibroblasts GCGGCAGAGG 3.5 0.0035 3T3 fibroblasts GCTAAAAAAA (2) 3.5 0.0035 3T3 fibroblasts TTCAAGTTTT (2) 3.5 0.0035 E15 cortex GATGCTGCCA 49.5 0.0495 E15 cortex ATTCCATCTT (2) 4.9 0.0049 E15 cortex GCTAAAAAAA (2) 4.9 0.0049 E15 cortex GCTACTGTCA 4.9 0.0049 P1 cortex TAATAAAATG 9.1 0.0091 P1 cortex GATGCTCCCA 4.5 0.0045 P1 cortex GATGCTGCCA 4.5 0.0045 P1 cortex GCTACTGTCA 4.5 0.0045 P1 cortex TTCAAGTTTT (2) 4.5 0.0045 Hypothalamus GCTAAAAAAA (2) 9.1 0.0091 Hypothalamus GATGCTGCCA 3.6 0.0036 Hypothalamus ATTCCATCTT (2) 1.8 0.0018 Hypothalamus GACGCTGCCA 1.8 0.0018 Hypothalamus GCTACTGTCA 1.8 0.0018 Hypothalamus TAATAAAATG 1.8 0.0018 Hypothalamus TGGTGGTCTT (2) 1.8 0.0018 Hypothalamus TTCAAGTTTT (2) 1.8 0.0018 E12.5 retina GATGCTGCCA 35.7 0.0357 E12.5 retina TTCAAGTTTT (2) 11.3 0.0113 E12.5 retina GCTACTGTCA 7.5 0.0075 E12.5 retina GCGGCAGAGG 5.6 0.0056 E12.5 retina GCGCCTGTGA 1.9 0.0019 E12.5 retina GTCCGGCGAT 1.9 0.0019 E12.5 retina TAATAAAATG 1.9 0.0019 E14.5 retina TTCAAGTTTT (2) 25.5 0.0255 E14.5 retina GATGCTGCCA 16.4 0.0164 E14.5 retina GCTACTGTCA 5.5 0.0055 E14.5 retina ATTCCATCTT (2) 3.6 0.0036 E14.5 retina TAATAAAATG 3.6 0.0036 E14.5 retina GTCCGGCGAT 1.8 0.0018 E14.5 retina TGGTGGTCTT (2) 1.8 0.0018 E14.5 retina TGTCAGCCAC 1.8 0.0018 E16.5 retina GATGCTGCCA 41.7 0.0417 E16.5 retina TTCAAGTTTT (2) 18.1 0.0181 E16.5 retina ATTCCATCTT (2) 7.2 0.0072 E16.5 retina GCTACTGTCA 7.2 0.0072 E16.5 retina TGGTGGTCTT (2) 5.4 0.0054 E16.5 retina GTCCGGCGAT 3.6 0.0036 E16.5 retina GCTAAAAAAA (2) 1.8 0.0018 E16.5 retina TAATAAAATG 1.8 0.0018 E16.5 retina TGTCAGCCAC 1.8 0.0018 E18.5 retina TTCAAGTTTT (2) 38.2 0.0382 E18.5 retina TAATAAAATG 12.7 0.0127 E18.5 retina GATGCTGCCA 10.9 0.0109 E18.5 retina GCGGCAGAGG 9.1 0.0091 E18.5 retina TGTCAGCCAC 3.6 0.0036 E18.5 retina GCTACTGTCA 1.8 0.0018 E18.5 retina TGCTGGCTCT 1.8 0.0018 P0.5 retina GATGCTGCCA 29.4 0.0294 P0.5 retina TTCAAGTTTT (2) 21.6 0.0216 P0.5 retina GCTACTGTCA 5.9 0.0059 P0.5 retina ATTCCATCTT (2) 3.9 0.0039 P0.5 retina TGTCAGCCAC 3.9 0.0039 P0.5 retina TGCTGGCTCT 2 0.002 P0.5 retina TGGTGGTCTT (2) 2 0.002 P2.5 retina TTCAAGTTTT (2) 14.1 0.0141 P2.5 retina GATGCTGCCA 12.3 0.0123 P2.5 retina GCGGCAGAGG 3.5 0.0035 P2.5 retina GCTACTGTCA 3.5 0.0035 P2.5 retina TGTCAGCCAC 3.5 0.0035 P2.5 retina GCGCCTGTGA 1.8 0.0018 P4.5 retina TTCAAGTTTT (2) 15.9 0.0159 P4.5 retina GCTACTGTCA 13.9 0.0139 P4.5 retina GATGCTGCCA 11.9 0.0119 P4.5 retina GCGGCAGAGG 4 0.004 P4.5 retina TAATAAAATG 4 0.004 P4.5 retina GCTAAAAAAA (2) 2 0.002 P4.5 retina TGTCAGCCAC 2 0.002 P6.5 retina GCGGCAGAGG 6.7 0.0067 P6.5 retina GCTACTGTCA 6.7 0.0067 P6.5 retina GATGCTGCCA 5 0.005 P6.5 retina CAGAGGTCAG 3.3 0.0033 P6.5 retina TAATAAAATG 3.3 0.0033 P6.5 retina ATTCCATCTT (2) 1.7 0.0017 P6.5 retina GTCCGGCGAT 1.7 0.0017 P6.5 retina TTCAAGTTTT (2) 1.7 0.0017 P10.5 crx- retina GACGCTGCCA 29.7 0.0297 P10.5 crx- retina TGTCAGCCAC 3.7 0.0037 P10.5 crx- retina GATGCTCCCA 1.9 0.0019 P10.5 crx- retina GTCCTGCGAT 1.9 0.0019 P10.5 crx- retina TAATAAAATG 1.9 0.0019 P10.5 crx- retina TTCAAGTTTT (2) 1.9 0.0019 P10.5 crx+ retina GACGCTGCCA 9.6 0.0096 P10.5 crx+ retina GCTACTGTCA 5.8 0.0058 P10.5 crx+ retina GTCCTGCGAT 5.8 0.0058 P10.5 crx+ retina CAGAGGTCAG 1.9 0.0019 P10.5 crx+ retina GCGGCAGAGG 1.9 0.0019 Adult retinal GATGCTGCCA 16.7 0.0167 Adult retinal GCTACTGTCA 3.7 0.0037 Adult retinal TTCAAGTTTT (2) 3.7 0.0037 Adult retinal ATTCCATCTT (2) 1.9 0.0019 Adult retinal TGGTGGTCTT (2) 1.9 0.0019 Adult retinal TGTCAGCCAC 1.9 0.0019 ONL GATGCTGCCA 9.6 0.0096 ONL ATTCCATCTT (2) 1.9 0.0019 ONL CAGAGGTCAG 1.9 0.0019 ONL GCTACTGTCA 1.9 0.0019