Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.30837
Ndrg1
N-myc downstream regulated gene 1
15
15 D2
17988
Mm.30837
Ndrl
N-myc downstream regulated-like
15
17990
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 7 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 42 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AGAGACAAGG
(
3
)
1.6
0.0016
P8 Cb GC
GAGGTGTCCT
(
2
)
1.6
0.0016
Cb medulloblastoma
AGAGACAAGG
(
3
)
2.3
0.0023
Cb medulloblastoma
GGCATTAGGC
(
2
)
2.3
0.0023
P8 GC+1d culture
GCGGCCCAGT
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
AGAGACAAGG
(
3
)
3.5
0.0035
3T3 fibroblasts
AGAGACAAGG
(
3
)
3.5
0.0035
3T3 fibroblasts
GAGGTGTCCT
(
2
)
3.5
0.0035
E15 cortex
GCGGCCCAGT
(
2
)
4.9
0.0049
P1 cortex
AGAGACAAGG
(
3
)
4.5
0.0045
Hypothalamus
AGAGACAAGG
(
3
)
7.2
0.0072
Hypothalamus
GGCATTAGGC
(
2
)
1.8
0.0018
E14.5 retina
AGAGACAAGG
(
3
)
1.8
0.0018
E14.5 retina
GCGGCCCAGT
(
2
)
1.8
0.0018
E14.5 retina
GGCATTAGGC
(
2
)
1.8
0.0018
E16.5 retina
AGAGACAAGG
(
3
)
10.9
0.0109
E18.5 retina
AGAGACAAGG
(
3
)
5.5
0.0055
E18.5 retina
CCGCCTATAG
(
2
)
1.8
0.0018
P0.5 retina
AGAGACAAGG
(
3
)
19.6
0.0196
P2.5 retina
AGAGACAAGG
(
3
)
19.4
0.0194
P2.5 retina
CCGCCTATAG
(
2
)
3.5
0.0035
P2.5 retina
ATAGACAAGG
(
2
)
1.8
0.0018
P4.5 retina
AGAGACAAGG
(
3
)
23.8
0.0238
P4.5 retina
CCGCCTATAG
(
2
)
5.9
0.0059
P4.5 retina
ATAGACAAGG
(
2
)
2
0.002
P6.5 retina
AGAGACAAGG
(
3
)
41.7
0.0417
P6.5 retina
CCGCCTATAG
(
2
)
8.3
0.0083
P6.5 retina
GGCATTAGGC
(
2
)
1.7
0.0017
P10.5 crx- retina
AGAGACAAGG
(
3
)
52
0.052
P10.5 crx- retina
CCGCCTATAG
(
2
)
1.9
0.0019
P10.5 crx- retina
GAGGTGTCCT
(
2
)
1.9
0.0019
P10.5 crx- retina
GGCATTAGGC
(
2
)
1.9
0.0019
P10.5 crx+ retina
AGAGACAAGG
(
3
)
15.4
0.0154
P10.5 crx+ retina
GAGGTGTCCT
(
2
)
1.9
0.0019
Adult retinal
AGAGACAAGG
(
3
)
7.4
0.0074
Adult retinal
GGGACAAGAG
(
2
)
3.7
0.0037
Adult retinal
CCGCCTATAG
(
2
)
1.9
0.0019
Adult retinal
GAGGTGTCCT
(
2
)
1.9
0.0019
ONL
AGAGACAAGG
(
3
)
13.4
0.0134
ONL
ATAGACAAGG
(
2
)
1.9
0.0019
ONL
GGCATTAGGC
(
2
)
1.9
0.0019
ONL
GGGACAAGAG
(
2
)
1.9
0.0019
